Job Description P06960 Confidence 72.18% Date Thu Jan 5 10:59:30 GMT 2012 Rank 269 Aligned Residues 104 % Identity 17% Template c3q0iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from vibrio cholerae Resolution 1.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.						.	.	.	.	.
Predicted Secondary structure																																																																	.	.						.	.	.	.	.
Query SS confidence																																																																	.	.						.	.	.	.	.
Query Sequence		M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	.	.	A	A	G	V	K	.	.	.	.	.	G	A	D	F	I
Query Conservation																																																																	.	.						.	.	.	.	.
Alig confidence									.	.																																.	.	.	.	.																			.	.						.	.	.	.	.
Template Conservation									.	.																																.	.	.	.	.
Template Sequence		L	R	I	V	F	A	G	.	.	T	P	D	F	A	A	R	H	L	A	A	L	L	S	S	E	H	E	I	I	A	V	Y	T	Q	P	E	T	A	S	P	.	.	.	.	.	V	K	T	L	A	L	E	H	N	V	P	V	Y	Q	P	E	N	F	K	S	D	E	S	K	Q	Q	L	A	A	L	N	A	D	L	X
Template Known Secondary structure									.	.		S												T	S	S	S															.	.	.	.	.								T	T							S		S		S									T	T			S
Template Predicted Secondary structure									.	.																																.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	.	.	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E
Query Conservation																																															.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	L	L	P	K	V	V	L	D	T	P	.	K	L	G	C	I	N	V	H	G	S	I	L	P	R	W	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								T	S	S	.	T	T							S	S	S	T	T	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.																			.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	S	I	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	A	P	I	Q	R
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions