Job Description P06960 Confidence 47.85% Date Thu Jan 5 10:59:30 GMT 2012 Rank 376 Aligned Residues 160 % Identity 16% Template c3pwzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida Resolution 1.71 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																								.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	.	.	.	.	.	.	.	.	.	.	G	V	P	V	W	N	G	L	T	N
Query Conservation																																								.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		H	G	L	F	A	Q	A	S	N	Q	Q	L	E	Y	G	A	I	E	G	S	L	.	.	.	.	D	D	F	E	A	Q	V	L	Q	F	R	S	E	G	G	K	G	M	N	I	T	A	P	F	K	L	R	A	F	E	L	A	D	R	R	S	E	R	A	Q	L	A	R	A	A	N	A	L	K	F	E	D	G	R	I
Template Known Secondary structure									T	T												T	.	.	.	.	T	T											T	T								T	T										S										T			S						T	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	.	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G
Query Conservation																																																					.
Alig confidence																					.															.	.																.									.	.	.	.	.	.	.	.
Template Conservation																					.															.	.																									.	.	.	.	.	.	.	.
Template Sequence		V	A	E	N	F	D	G	I	G	L	L	R	D	I	E	E	N	L	G	.	E	P	L	R	N	R	R	V	L	L	L	G	A	G	.	.	G	A	V	R	G	A	L	L	P	F	L	Q	A	G	P	S	E	L	V	I	A	N	R	D	.	.	.	.	.	.	.	.	M	A	K	A	L	A	L	R	N	E	L	D
Template Known Secondary structure																	T	T	S		.				T	T	S								S	.	.													T			S							S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.															.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		G	K	I	T	L	T	E	D	V	A	A	.	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		H	S	R	L	R	I	S	R	Y	E	A	L	E	G	Q	S	F	D	I	V	V	N	A	T	S	A	S	L
Template Known Secondary structure			T	T						S	G	G	G	T	T				S						S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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