Job Description P06960 Confidence 97.72% Date Thu Jan 5 10:59:30 GMT 2012 Rank 54 Aligned Residues 143 % Identity 18% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.		.
Template Conservation																																																																							.		.
Template Sequence		Q	A	A	A	A	A	G	L	T	V	A	E	V	T	G	S	N	V	V	S	V	A	E	D	E	L	M	R	I	L	I	L	M	R	N	F	V	P	G	Y	N	Q	V	V	K	G	E	W	N	V	A	G	I	A	Y	R	A	Y	D	L	E	G	K	T	I	G	T	V	G	.	A	.	G	R	I	G	K	L	L	L
Template Known Secondary structure								T							T	T	S	S																	T	T										T	T				T					T	T				S	T	T								.		.	S
Template Predicted Secondary structure																																																																							.		.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.		200	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	K	P	F	G	C	N	L	L	Y	H	D	R	L	Q	M	A	P	E	L	E	K	E	.	.	.	.	.	.	.	.	.	.	.	T	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I	N	M	P	L	T	E	K	T	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G									S	S										.	.	.	.	.	.	.	.	.	.	.		T					S	S					G	G	G		S						S				T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.												.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F
Query Conservation
Alig confidence												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	N	K	E	L	I	G	K	L	.	K	K	G	V	L	I	V	N	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	A	I	M	E	R	Q	A	V
Template Known Secondary structure			B							T	S	.		T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	B
Template Predicted Secondary structure												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.																						.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions