Job Description P06960 Confidence 98.33% Date Thu Jan 5 10:59:30 GMT 2012 Rank 46 Aligned Residues 241 % Identity 17% Template c3gvpB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:adenosylhomocysteinase 3; PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3 Resolution 2.25 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																															.	.																														.	.	.	.
Template Conservation																																															.	.
Template Sequence		I	K	Q	A	E	F	G	R	R	E	I	E	I	A	E	Q	E	M	P	A	L	M	A	L	R	K	R	A	Q	G	E	K	P	L	A	G	A	K	I	V	G	C	T	H	I	.	.	T	A	Q	T	A	V	L	M	E	T	L	G	A	L	G	A	Q	C	R	W	A	A	C	N	I	Y	S	T	L	N	E	V	A
Template Known Secondary structure		G	G	G														T												S	T	T		T	T	T	T										.	.	S													T	T								S	S	S	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
															86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																																		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	L	A	E	S	G	F	P	V	F	A	W	K	G	E	S	E	D	D	F	W	W	C	I	D	R	C	V	N	V	E	G	W	Q	P	N	M	I	L	D	D	G	G	D	L	T	H	W	I	Y	K	K	Y	P	N	M	F	K	K	I	K	G	I	V	E	E	S	V	T	G	V	H	R	L	Y	Q	L	A	G
Template Known Secondary structure							T	T							T	T																B	T	T	B			S					S	S	S																T		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.															.	.	.	.	.	.	.	.	.
Query SS confidence										.															.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	G	V	P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	.	.	.	.	.	.	.	.	.	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P
Query Conservation										.															.	.	.	.	.	.	.	.	.
Alig confidence										.				.	.	.	.								.	.	.	.	.	.	.	.	.										.													.	.
Template Conservation														.	.	.	.																										.													.	.
Template Sequence		K	L	C	V	P	A	M	N	V	N	D	S	.	.	.	.	V	T	K	Q	K	F	D	N	L	Y	C	C	R	E	S	I	L	D	G	L	K	R	T	T	D	.	M	M	F	G	G	K	Q	V	V	V	C	G	.	.	Y	G	E	V	G	K	G	C	C	A	A	L	K	A	M	G	S	I	V	Y	V	T	E	I
Template Known Secondary structure					S						T	T		.	.	.	.								T																		.				T	T								.	.		S													T	T								S
Template Predicted Secondary structure														.	.	.	.																										.													.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		D	P	I	C	A	L	Q	A	C	M	D	.	.	.	.	.	.	.	.	.	.	.	.	G	F	R	L	V	K	L	N	E	V	I	R	Q	V	D	I	V	I	T	C	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	N	V	V	T	R	E	H	L	D	R	M	.	K	N	S	C
Template Known Secondary structure		S										T	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T	T		S						S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	B								S	.		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.													.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.																		.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	C	N	M	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	T	E	I	D	V	A	S	L	R	T	P
Template Known Secondary structure							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	B	T	G	G	G	G		S	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480																					.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions