Job Description P06960 Confidence 96.27% Date Thu Jan 5 10:59:30 GMT 2012 Rank 103 Aligned Residues 103 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	.	.	.	.	.	.	.	.	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																				.												.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	P	A	H	M	Y	N	L	T	V	A	A	L	E	R	L	G	K	.	K	M	D	G	S	K	V	A	M	L	G	W	A	F	I	K	D	S	D	D	A	R	N	T	P	S	E	P	Y	R	D	L	C	L	K	A	G	A	S	V	M	V	H	D	P	Y	V	V	N	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	T		.		S	T	T								S	S	S	S	T	T		S			T	T		T												T								S	S				B	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	.	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G
Query Conservation																								.
Alig confidence		.	.	.	.	.																		.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	G	V	E	I	S	D	N	L	E	E	V	V	R	N	A	D	A	I	V	V	L	A	G	H	S	A	Y	S	S	L	K	A	D	W	A	K	K	V	S	A	K	A	N
Template Known Secondary structure		.	.	.	.	.	T	T	B				S							T	T		S						S							S													S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions