Job Description P06960 Confidence 28.21% Date Thu Jan 5 10:59:30 GMT 2012 Rank 496 Aligned Residues 102 % Identity 11% Template c3dcmX_ PDB info PDB header:transferase Chain: X: PDB Molecule:uncharacterized protein tm_1570; PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine Resolution 2.00 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.												.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230
Predicted Secondary structure															.																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence															.																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		G	N	S	M	L	E	A	A	A	L	T	G	L	.	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	.	.	.	.	.	.	.	.	.	.	.	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	.	.	.	.	.	.	.	F	I	Y
Query Conservation															.																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence															.										.																					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		V	H	D	I	A	R	T	A	R	T	Y	N	L	K	G	Y	Y	I	V	T	N	L	R	.	A	Q	Q	D	M	V	S	K	M	L	K	F	W	R	E	G	F	G	S	R	Y	N	P	S	R	A	E	S	L	K	L	V	K	L	K	S	Y	L	E	D	V	L	E	D	I	E	S	V	E	G	E	R	P	L	I	F
Template Known Secondary structure												T	T		S										.															T	S	G	G	G	G	T		S	S	S					T	T					S	S													S	S
Template Predicted Secondary structure																									.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	.	.	.	.	.	.	.	.	.	.	.	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		F	T	S	A	K	K	R	E	N	D	I	S	F	E	E	G	R	R	I	I	I	E	T	E	K	P	V	L	I	L	L	G	T	G	W	G	L	P	D	E	I	L	E	I	S	D	.	.	.	.	Y	V	L	E	P	I	R
Template Known Secondary structure					S	S			S	S		B														S									T	T								T	T		S	.	.	.	.			B			T	T
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions