Job Description P06960 Confidence 50.95% Date Thu Jan 5 10:59:30 GMT 2012 Rank 363 Aligned Residues 145 % Identity 16% Template c3dahB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei Resolution 2.30 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.											.	.	.													.
Query SS confidence																				.	.	.	.	.	.	.											.	.	.													.
Query Sequence		C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	.	.	.	.	.	.	.	P	S	G	S	Q	I	G	H	K	E	.	.	.	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V	P	V	W	N	G	L
Query Conservation																				.	.	.	.	.	.	.											.	.	.													.
Alig confidence																				.	.	.	.	.	.	.											.	.	.													.																	.	.	.										.
Template Conservation																																																																					.	.	.										.
Template Sequence		M	I	M	V	D	A	L	K	R	A	S	A	G	R	I	T	A	A	I	P	Y	F	G	Y	A	R	Q	D	R	R	P	R	S	A	R	V	A	I	S	A	K	V	V	A	N	M	L	E	I	A	G	V	E	R	I	I	T	M	D	L	H	A	D	Q	I	Q	G	.	.	.	F	F	D	I	P	V	D	N	I	.
Template Known Secondary structure											T	T	B	S							S	S		T	T	T	T			S		G	G	G		S																T								S		S		G	G	G	G	G	.	.	.	G		S	S						.
Template Predicted Secondary structure																																																																					.	.	.										.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	.	.	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	Y	A	T	P	I	L	L	G	D	L	R	K	Q	N	Y	P	D	L	L	V	V	S	P	D	V	G	G	V	V	R	A	R	A	L	A	K	Q	L	N	C	D	L	A	I	G	E	V	E	G	R	T	C	V	I	M	D	D	M	V	D	T	A	G	T	L	C	K	A	A	Q	V	L	K	E	R	G
Template Known Secondary structure		.	.	.	.		S												T		T	T						S	S	S	T	T												T									T	T											S	S												T	T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		182		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D
Query Conservation			.
Alig confidence			.																	.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		A	K	Q	V	F	A	Y	A	T	H	P	V	L	S	G	G	A	A	.	.	.	.	.	D	R	I	A	A	S	A	L	D	E	L	V	V	T	D
Template Known Secondary structure			S													S	S			.	.	.	.	.					T	S	S		S						S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions