Job Description P06960 Confidence 97.65% Date Thu Jan 5 10:59:30 GMT 2012 Rank 56 Aligned Residues 240 % Identity 19% Template c3d64A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																													.	.																																.	.	.	.
Template Conservation																																													.	.
Template Sequence		I	A	L	A	G	W	G	R	K	E	L	N	I	A	E	T	E	M	P	G	L	V	Q	I	R	D	E	Y	K	A	Q	Q	P	L	K	G	A	R	I	A	G	S	L	.	.	H	M	T	I	Q	T	G	V	L	I	E	T	L	K	A	L	G	A	D	V	R	W	A	S	C	N	I	F	S	T	Q	D	H	A	A
Template Known Secondary structure		G	G	G												G	G	G											T	T	T	T		T	T	T	T							S	.	.			S													T	T								S	S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
															86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	.	.	.	.	.	.	.	.	D	G	I	Q	Y	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	V	E	A	G	T	P	V	F	A	F	K	G	E	S	L	D	E	Y	W	E	F	S	H	R	I	F	E	W	P	N	G	E	F	A	N	M	I	L	D	D	G	G	D	A	T	L	L	L	I	L	G	S	K	A	E	K	D	R	S	V	I	A	R	P	T	N	E	E	E	V	A	L	F	K	S	I	E
Template Known Secondary structure							T	T							T	T													T	T			S	T	T									S	S	S																G	G	G	G	T				S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
																											109	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.								.																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.								.																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	Q	E	V	V	E	T	L	A	Q	Y	.	.	A	G	V	P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	.	.	.	.	.	.	.	.	.	T	M	Q	E	H	L	P	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.								.																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.								.				.	.	.	.										.	.	.	.	.	.	.	.	.							.
Template Conservation																																																				.	.	.	.																									.
Template Sequence		R	H	L	E	I	D	G	S	W	Y	S	K	R	L	A	H	I	K	G	V	T	E	E	T	T	T	G	V	H	R	L	Y	Q	M	E	K	D	G	R	L	P	F	P	A	F	N	V	N	D	S	.	.	.	.	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	S	L	V	D	G	I	K	R	A	T	.	D
Template Known Secondary structure					T	T		T	T	T	T					T	T								S													T	T				S						T	T	S	.	.	.	.														T	T										.
Template Predicted Secondary structure																																																				.	.	.	.																									.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T
Query Conservation
Alig confidence																.	.																				.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																.	.																				.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		V	M	I	A	G	K	I	A	V	V	A	G	Y	G	.	.	D	V	G	K	G	C	A	Q	S	L	R	G	L	G	A	T	V	W	V	.	.	.	.	.	T	E	I	D	P	I	C	A	L	Q	A	A	.	.	.	.	.	.	.	M	E	G	Y	R	V	V	T	M	E	Y	A	A	D	K	A	D	I	F	V	T
Template Known Secondary structure					T	T									S	.	.												T	T	T						.	.	.	.	.			S										.	.	.	.	.	.	.	T	T	T										T	T	T		S
Template Predicted Secondary structure																.	.																				.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E	S
Query Conservation
Alig confidence				.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	.	.	.	.	G	N	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	N	H	D	H	M	K	A	M	.	R	H	N	A	I	V	C	N	I	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	S	E	I	D	V	A	S	T	R	Q
Template Known Secondary structure			S	.	.	.	.	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	S	B									.		T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S	B			G	G	G	T	T
Template Predicted Secondary structure				.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.					320	.	.	.														.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.																					.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions