Job Description P06960 Confidence 100.00% Date Thu Jan 5 10:59:30 GMT 2012 Rank 4 Aligned Residues 328 % Identity 48% Template c2w37A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic; PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	Y	K	K	H	F	L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	F	Q	G	R	S	V	L	A	E	K	D	F	S	A	A	E	L	E	Y	L	I	D	F	G	L	H	L	K	A	L	K	K	A	G	I	P	H	H	Y	L	E	G	K	N	I	A	L	L	F	E	K	S	S	T	R	T	R	S	A	F	T	T	A	S	I	D	L	G	A	H	P	E	Y	L	G	Q	N	D
Template Known Secondary structure		B	T	T	T	T			B			G	G	G	S																						T					T	T	T	T								S	S																T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y
Query Conservation
Alig confidence																																																																							.	.
Template Conservation																																																																							.	.
Template Sequence		I	Q	L	G	K	K	E	S	T	S	D	T	A	K	V	L	G	S	M	F	D	G	I	E	F	R	G	F	K	Q	S	D	A	E	I	L	A	R	D	S	G	V	P	V	W	N	G	L	T	D	E	W	H	P	T	Q	M	L	A	D	F	M	T	V	K	E	N	F	G	.	.	K	L	Q	G	L	T	L	T	F
Template Known Secondary structure				T	T	T	S	S														S						S	S												S	S	S								S	S																		S	.	.			T	T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	D	G	R	N	N	V	A	N	S	L	L	V	T	G	A	I	L	G	V	N	I	H	I	V	A	P	K	A	L	F	P	T	E	E	T	Q	N	I	A	K	G	F	A	E	K	S	G	A	K	L	V	I	T	D	D	L	D	E	G	L	K	G	S	N	V	V	Y	T	D	V	W	V	S	M	G	E	S	N
Template Known Secondary structure			S		T	T	S														T									G	G	G	S																	T							S							T	T		S							S			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	.	.	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N
Query Conservation																										.	.
Alig confidence			.	.																						.	.																															.
Template Conservation			.	.																																																						.
Template Sequence		W	.	.	E	E	R	V	K	E	L	T	P	Y	Q	V	N	M	E	A	M	K	K	T	G	T	P	D	D	Q	L	I	F	M	H	C	L	P	A	F	H	N	T	D	T	Q	Y	G	K	E	I	K	E	K	Y	G	I	.	T	E	M	E	V	T	D	E	V	F	T	S	K	Y	A	R	Q	F	E	E	A	E	N
Template Known Secondary structure			.	.								G	G	G		B							T	T				G	G	G							S					S	S		S													.				S	B						T	S	T	T	B
Template Predicted Secondary structure			.	.																																																						.
Template SS confidence
		246			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	H	T	I	K	A	V	M	M	A	T	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	H	S	I	K	A	M	M	A	A	T	L	G	N
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions