Job Description P06960 Confidence 76.55% Date Thu Jan 5 10:59:30 GMT 2012 Rank 255 Aligned Residues 63 % Identity 13% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T
Query Conservation
Alig confidence										.		.																								.	.	.	.	.											.	.	.	.	.	.
Template Conservation										.		.																								.	.	.	.	.											.	.	.	.	.	.
Template Sequence		D	K	K	I	G	F	L	G	.	L	.	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	.	.	.	.	.	T	A	E	K	C	D	L	F	I	Q	.	.	.	.	.	.	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	C	D	I	T	F	A
Template Known Secondary structure		S	S							.		.	S													T	T								S	.	.	.	.	.	S	G	G	G	G						.	.	.	.	.	.	T	T					S										S
Template Predicted Secondary structure										.		.																								.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.		.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions