Job Description P06960 Confidence 49.59% Date Thu Jan 5 10:59:30 GMT 2012 Rank 371 Aligned Residues 136 % Identity 15% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																							.	.																														.	.	.	.	.
Query SS confidence																							.	.																														.	.	.	.	.
Query Sequence		I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	.	.	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	.	.	.	.	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V
Query Conservation																							.	.																														.	.	.	.	.
Alig confidence																							.	.										.	.	.	.	.	.	.	.	.												.	.	.	.	.										.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		I	W	T	V	S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	.	.	.	.	.	.	.	.	.	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	.	.	.	N	G	A	Y	L	K	S	R	L	S	V
Template Known Secondary structure							S	S	T										T	T	T	T	T	T	S									.	.	.	.	.	.	.	.	.													T	T				S								.	.	.							T	T		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.
		124	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		P	V	W	N	.	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C
Query Conservation						.
Alig confidence						.				.	.	.	.	.	.	.	.													.	.	.											.	.																										.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.													.	.	.											.	.																										.	.	.	.
Template Sequence		P	V	I	L	I	K	P	S	.	.	.	.	.	.	.	.	G	Y	D	V	L	Q	F	L	A	K	A	G	.	.	.	K	L	T	S	S	I	G	V	V	T	.	.	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	.	.	.	.	T	E	E	D	A	R	G	Q
Template Known Secondary structure										.	.	.	.	.	.	.	.											T	T	.	.	.		T	T	S							.	.		S	S													T									S	.	.	.	.	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.													.	.	.											.	.																										.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	E	K	H	G	G	K	I	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	E	L	K	A	N	G	T	E	A	V	V
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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