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Job DescriptionP06960
Confidence97.39%DateThu Jan 5 10:59:30 GMT 2012
Rank62Aligned Residues144
% Identity13%Templatec2nacA_
PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a))Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130..... ....140......... 150.........160.........170...
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Query Sequence  ETLAQYAGVPVWNGLTNEFHP. . TQLLADLMTMQEHL. . . . . . . . . . . . . . . . . . . PGKAFNEMTLVYAGDARNNMGNSM
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Template Sequence  LQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVA. A. GRIGLAV
Template Known Secondary structure  TT

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   129130.........140.........150.........160.........170.........180.........190........ . 200......
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  LEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEAKEKWAERIALLRG
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Template Sequence  LRRLAPFDVHLHYTDRHRLPESVEKE. . . . . . . . . . . LNLTWHATREDMYPVCDVVTLNCPLHPETEH. . . . . . . . . . . .
Template Known Secondary structure  GGGT

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SSGGG
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   207..210.........220.........230.. .......240.........250.........260...
 
   254.....260.........270.........280.........290.........300......
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Query Sequence  YQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVF
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Template Sequence  . MINDETLKLF. KRGAYIVNTA. . . . . . . . . . . . . . . . . . . . . RGKLCDRDAV
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BSTTS.
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GGGB
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   264.....270... ......280... ......290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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