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Job Description | P06960 | Confidence | 87.86% | Date | Thu Jan 5 10:59:30 GMT 2012 |
Rank | 189 | Aligned Residues | 125 |
% Identity | 10% | Template | c2ldxA_ |
PDB info |
PDB header:oxidoreductase(choh(d)-nad(a)) | Chain: A: PDB Molecule:apo-lactate dehydrogenase; |
PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4
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Resolution | 2.96 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | M | Q | E | H | L | P | G | K | A | F | N | E | M | T | L | V | Y | A | G | D | A | R | N | N | M | G | N | S | M | L | E | A | A | A | L | T | G | L | . |
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D | L | R | L | L | A | P | K | A | C | W | P | E | E | S | L | V | A | E | C | S | A | L | A | E | K | H | G | G | K | I | T | L | T | E | D | V | A | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | I | Q | N | L | V | P | E | D | K | L | S | R | C | K | I | T | V | V | G | . |
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G | D | V | G | M | A | C | A | I | S | I | L | L | K | G | L | A | D | E | L | A | L | V | D | A | D | T | . |
D | K | L | R | G | E | A | L | D | L | Q | H | G | S | L | F | L | S | T | P | K | I | V | F | G | K | D | Y | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
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222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | V | K | G | A | D | F | I | Y | T | D | V | W | V | S | M | G | E | A | K | E | K | W | A | E | R | I | A | L | L | R | G | Y | Q | V | N | A | Q | M | M | A | L | T | D | N | P | N | V | K | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | S | A | N | S | K | L | V | I | I | T | A | G | A | R | M | V | S | G | Q | T | R | L | D | L | L | Q | R | N | V | A | I | M | K | A | I | V | P | G | V | I | Q | N | . |
S | P | D | C | K | I | I |
Template Known Secondary structure |   |
G | G | T | T |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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