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Job DescriptionP06960
Confidence87.86%DateThu Jan 5 10:59:30 GMT 2012
Rank189Aligned Residues125
% Identity10%Templatec2ldxA_
PDB info PDB header:oxidoreductase(choh(d)-nad(a))Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4
Resolution2.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170.........180.. .......190.........200.........210.........220.
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Query Sequence  TMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGL. . DLRLLAPKACWPEESLVAECSALAEKHGGKITLTEDVAA
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Template Sequence  LIQNLVPEDKLSRCKITVVG. V. GDVGMACAISILLKGLADELALVDADT. DKLRGEALDLQHGSLFLSTPKIVFGKDYN
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   7..10.........20...... . ..30.........40.........50.... .....60.........70.........80...
 
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Query Sequence  GVKGADFIYTDVWVSMGEAKEKWAERIALLRGYQVNAQMMALTDNPNVKFL
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Template Sequence  VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN. SPDCKII
Template Known Secondary structure  GGTT

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   84.....90.........100.........110.........120...... ...130...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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