Job Description P06960 Confidence 86.45% Date Thu Jan 5 10:59:30 GMT 2012 Rank 194 Aligned Residues 164 % Identity 13% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																														.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.										.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	H	.	.	.	.	.	.	.	.	.	.	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V	P	V
Query Conservation																																														.										.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.														.										.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		S	L	S	P	V	F	Q	N	A	L	I	R	Y	A	G	L	N	A	V	Y	L	A	F	E	I	N	P	.	.	.	.	E	E	L	K	K	A	F	E	G	F	K	A	L	K	V	K	G	I	N	V	T	V	P	F	K	E	E	I	I	P	L	L	D	Y	V	E	D	T	A	K	E	I	G	A	V	N	T	V	K
Template Known Secondary structure			S													T		S										G	.	.	.	.	G	G											T	T								T	T		T	T	T	T	G	G	G		S										T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L
Query Conservation
Alig confidence																											.	.														.	.																								.	.	.	.	.	.	.	.
Template Conservation																											.	.														.	.																								.	.	.	.	.	.	.	.
Template Sequence		F	E	N	G	K	A	Y	G	Y	N	T	D	W	I	G	F	L	K	S	L	K	S	L	I	P	.	.	E	V	K	E	K	S	I	L	V	L	G	A	G	.	.	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	K	V	F	L	W	N	R	T	.	.	.	.	.	.	.	.	K	E	K	A	I	K	L
Template Known Secondary structure				T	T																	T	T	T		S	.	.			T	T									S	.	.													T	T								S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.														.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		A	Q	K	F	P	.	.	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N	T	T	S	V	G	L	K
Template Known Secondary structure					S		.	.					S		G	G	G	T	G	G	G		S						S	S	T	T	S	S
Template Predicted Secondary structure							.	.
Template SS confidence
		163	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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