Job Description P06960 Confidence 100.00% Date Thu Jan 5 10:59:30 GMT 2012 Rank 17 Aligned Residues 285 % Identity 42% Template c2ef0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from thermus2 thermophilus Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	K	H	F	L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		L	P	K	D	L	L	D	F	S	G	Y	G	P	K	E	L	Q	A	L	L	D	L	A	E	Q	L	K	R	E	R	Y	R	G	.	.	.	E	D	L	K	G	K	V	L	A	L	L	F	E	K	P	S	L	R	T	R	T	T	L	E	V	A	M	V	H	L	G	G	H	A	V	Y	L	D	Q	K	Q	V	G	I
Template Known Secondary structure				S		B	S	S	S	T	T																				T				.	.	.		T	T	T	T								S	S																T	T								G	G	G	S		T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D
Query Conservation
Alig confidence																																																																				.	.
Template Conservation																																																																				.	.
Template Sequence		G	E	R	E	P	V	R	D	V	A	K	N	L	E	R	F	V	E	G	I	A	A	R	V	F	R	H	E	T	V	E	A	L	A	R	H	A	K	V	P	V	V	N	A	L	S	D	R	A	H	P	L	Q	A	L	A	D	L	L	T	L	K	E	V	F	G	.	.	G	L	A	G	L	E	V	A	W	V	G	D
Template Known Secondary structure		T	T												T	T	T		S							S	S												S	S								S	S																		S	.	.			T	T							S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W
Query Conservation
Alig confidence		.																																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation		.																																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		.	G	N	N	V	L	N	S	L	L	E	V	A	P	L	A	G	L	K	V	R	V	A	T	P	K	G	Y	E	P	D	P	G	L	L	K	R	A	N	.	.	.	.	.	.	.	.	.	A	F	F	T	H	D	P	K	E	A	A	L	G	A	H	A	L	Y	T	D	V	W	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.																T									T	T												T	.	.	.	.	.	.	.	.	.					S							T	T		S									.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																							.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F	E	S	A	A	S	I	V	F	D	Q	A	E	N	R	M	H	T	I
Query Conservation
Alig confidence																						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	R	L	R	D	F	Q	G	F	Q	V	N	G	E	L	L	K	L	L	.	R	P	E	G	V	F	L	H	C	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	Y	G	E	E	T	T	E	E	A	V	H	G	P	R	S	R	V	F	D	Q	A	E	N	R	L	H	T	A
Template Known Secondary structure								T	T	T			B						T	T	S	.		T	T							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	B							S	T	T	B
Template Predicted Secondary structure																						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.																			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		325	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	M	M	A	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	V	L	L	T	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions