Job Description P06960 Confidence 52.41% Date Thu Jan 5 10:59:30 GMT 2012 Rank 357 Aligned Residues 112 % Identity 14% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.															.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																							.	.	.	.	.
Template Conservation																	.	.																												.	.																							.	.	.	.	.
Template Sequence		A	K	A	L	Q	Y	A	F	F	A	E	K	S	A	N	.	.	K	W	S	T	P	S	G	A	S	W	K	T	A	S	A	Q	P	V	S	S	V	G	V	L	G	L	G	.	.	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	S	V	V	A	V	E	S	.	.	.	.	.	D	P	K	Q	L	D	A
Template Known Secondary structure											G	G	G	G	G	G	.	.	S		B		T	T			B	T	T	T															S	.	.												T	T	T								S	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.																												.	.																							.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.						.	.	330	.	.	.	.
		202	.	.	.	.	.	.	.																	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	S	A	L	A	E	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.													.	.	.	.	.	.	.												.	.	.	.	.	.								.
Template Conservation																																					.													.	.	.	.	.	.	.												.	.	.	.	.	.								.
Template Sequence		A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	.	E	L	S	T	V	D	L	V	V	E	A	V	.	.	.	.	.	.	.	F	E	D	M	N	L	K	K	K	V	F	.	.	.	.	.	.	A	E	L	S	A	L	C	.
Template Known Secondary structure																				T	T												S		G	G	.	G	G	T	T		S							.	.	.	.	.	.	.		S										.	.	.	.	.	.							S	.
Template Predicted Secondary structure																																					.													.	.	.	.	.	.	.												.	.	.	.	.	.								.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.								.	.	.	.	.	.	.	.	390	.	.							.	.	.	.	.	.	.
		266	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	N	V	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	G	A	F	L
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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