Job Description P06960 Confidence 30.41% Date Thu Jan 5 10:59:30 GMT 2012 Rank 484 Aligned Residues 127 % Identity 20% Template c1ww8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate oxidoreductase; PDBTitle: crystal structure of malic enzyme from pyrococcus2 horikoshii ot3 Resolution 2.50 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.											.	.	.	.
Query SS confidence																																																.	.	.	.	.	.											.	.	.	.
Query Sequence		L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	.	.	.	.	.	.	L	R	L	L	A	P	K	A	C	W	.	.	.	.	P	E	E	S	L	V	A	E	C	S	A	L	A	E
Query Conservation																																																.	.	.	.	.	.											.	.	.	.
Alig confidence															.																				.	.												.	.	.	.	.	.											.	.	.	.
Template Conservation															.																				.	.
Template Sequence		V	L	A	G	L	L	N	A	L	K	V	V	G	.	K	K	I	S	E	I	T	L	A	L	F	G	A	G	A	A	G	F	A	.	.	T	L	R	I	L	T	E	A	G	V	K	P	E	N	V	R	V	V	E	L	V	N	G	K	P	R	I	L	T	S	D	L	D	L	E	K	L	F	P	Y	R	G	W	L	L
Template Known Secondary structure													T	T	.			T	T	T									S						.	.									T			G	G	G								T	T							T	T	S						S	T	T
Template Predicted Secondary structure															.																				.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	T	N	G	E	N	I	E	G	G	P	Q	E	A	L	K	D	A	D	V	L	I	S	F	T	R	P	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	K	P	Q	W	I	E	K	X	.	N	E	D	A	I	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			T	T				S	S						T	T		S									S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						T	T	S	.		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		P	L	A	N	P	V	P	.	.	.	.	.	E	I	L	P	E
Template Known Secondary structure					S	S	S		.	.	.	.	.	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300						.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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