Job Description P06960 Confidence 97.90% Date Thu Jan 5 10:59:30 GMT 2012 Rank 52 Aligned Residues 236 % Identity 15% Template c1v8bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of a hydrolase Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																													.	.																																.	.	.	.
Template Conservation																																													.	.
Template Sequence		I	S	L	A	P	F	G	K	M	Q	M	E	I	S	E	N	E	M	P	G	L	M	R	I	R	E	E	Y	G	K	D	Q	P	L	K	N	A	K	I	T	G	C	L	.	.	H	M	T	V	E	C	A	L	L	I	E	T	L	Q	K	L	G	A	Q	I	R	W	C	S	C	N	I	Y	S	T	A	D	Y	A	A
Template Known Secondary structure		G	G	G												G	G	G											S	T	T	T		T	T	T	T							S	.	.			S													T	T								S	S	S	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
																86	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	.	.	.	.	.	.	.	.	.	Y	D	G	I	Q	Y	R	G	H	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	V	S	T	L	E	N	V	T	V	F	A	W	K	N	E	T	L	E	E	Y	W	W	C	V	E	S	A	L	T	W	G	D	G	D	D	N	G	P	D	M	I	V	D	D	G	G	D	A	T	L	L	V	H	K	G	V	E	Y	E	K	L	Y	E	E	K	N	I	L	P	D	P	E	K	A	K	N	E	E
Template Known Secondary structure					T	T	S	T	T							T	T																	S	S	S	S	S		S		S					S	S	S																									G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																																							112	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.									.									.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.									.									.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	V	E	T	L	A	Q	.	.	Y	A	G	V	P	V	W	N	.	G	L	T	N	E	F	H	P	.	.	.	.	.	.	.	T	Q	L	L	A	D	L	M	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.									.									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.									.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	C	F	L	T	L	L	K	N	S	I	L	K	N	P	K	K	W	T	N	I	A	K	K	I	I	G	V	S	E	E	T	T	T	G	V	L	R	L	K	K	M	D	K	Q	N	E	L	L	F	T	A	I	N	V	N	D	A	V	T	K	Q	K	Y	D	N	V	Y	G	C	R	H	S	L	P	D	G	L	M
Template Known Secondary structure														T	T		T	T							T	T								S													T	T				S						T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K
Query Conservation
Alig confidence		.				.	.														.	.																												.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation		.				.	.														.	.																												.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		.	R	A	T	.	.	D	F	L	I	S	G	K	I	V	V	I	C	G	.	.	Y	G	D	V	G	K	G	C	A	S	S	M	K	G	L	G	A	R	V	Y	I	T	E	I	D	P	I	.	.	.	.	.	.	.	.	.	C	A	I	Q	A	V	M	E	G	F	N	V	V	.	.	.	T	L	D	E	I	V	D
Template Known Secondary structure		.				.	.					T	T	S							.	.		S														T								S				.	.	.	.	.	.	.	.	.							T	T	T					.	.	.						T	T
Template Predicted Secondary structure		.				.	.														.	.																												.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
			249	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.										.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	D	F	F	I	T	C	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	D	V	I	K	L	E	H	L	L	K	M	.	K	N	N	A	V	V	G	N	I	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	D	E	I	Q
Template Known Secondary structure		T		S							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	B						T	T		.		T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S	B
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.																		.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.																					.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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