Job Description P06960 Confidence 50.48% Date Thu Jan 5 10:59:30 GMT 2012 Rank 367 Aligned Residues 159 % Identity 13% Template c1nytC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ Resolution 1.50 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.			.	.	.		.	.	130
Predicted Secondary structure																																								.																		.	.	.	.	.	.	.								.	.				.				.
Query SS confidence																																								.																		.	.	.	.	.	.	.								.	.				.				.
Query Sequence		F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K	E	S	I	K	D	T	A	R	V	L	G	R	M	.	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	V	E	T	L	.	.	.	.	.	.	.	A	Q	Y	A	G	V	P	.	.	V	W	N	.	G	L	T	.
Query Conservation																																								.																		.	.	.	.	.	.	.								.	.				.				.
Alig confidence																							.	.	.	.														.																		.	.	.	.	.	.	.								.	.				.				.
Template Conservation																							.	.	.	.
Template Sequence		H	Q	Q	F	A	Q	Q	L	N	I	E	H	P	Y	G	R	V	L	A	P	I	.	.	.	.	N	D	F	I	N	T	L	N	A	F	F	S	A	G	G	K	G	A	N	V	T	V	P	F	K	E	E	A	F	A	R	A	D	E	L	T	E	R	A	A	L	A	G	A	V	N	T	L	M	R	L	E	D	G	R
Template Known Secondary structure										T												T	.	.	.	.	T												T	T								T	T										S										T	S		S						T	T	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G
Query Conservation
Alig confidence																						.	.														.	.																								.	.	.	.	.	.	.	.
Template Conservation																						.	.														.	.																								.	.	.	.	.	.	.	.
Template Sequence		L	L	G	D	N	T	D	G	V	G	L	L	S	D	L	E	R	L	S	F	.	.	I	R	P	G	L	R	I	L	L	I	G	A	G	.	.	G	A	S	R	G	V	L	L	P	L	L	S	L	D	C	A	V	T	I	T	N	R	T	.	.	.	.	.	.	.	.	V	S	R	A	E	E	L	A	K	L	F	A
Template Known Secondary structure																				T		.	.			T	T									S	.	.													T	T								S	S	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																						.	.														.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.
				211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		H	T	G	S	I	Q	A	L	S	M	D	E	L	E	G	H	E	F	D	L	I	I	N	A	T	S	S	G	I
Template Known Secondary structure		T	T	S							T	G	G	G	T	T				S						S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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