Job Description P06960 Confidence 97.12% Date Thu Jan 5 10:59:30 GMT 2012 Rank 75 Aligned Residues 126 % Identity 16% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.																		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	.	.	T	Q	L	L	A	D	L	M	T	M	Q	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A
Query Conservation																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.		.
Template Conservation																																																																					.		.
Template Sequence		A	K	A	K	E	L	G	F	Q	I	T	N	V	P	V	Y	S	P	N	A	I	A	E	H	A	A	I	Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	R	E	V	R	D	Q	V	V	G	V	V	G	.	T	.	G	H	I	G	Q	V	F	M	Q	I
Template Known Secondary structure							T	T									S																			T										T	T					T	T						G	G	G	S							.		.	S
Template Predicted Secondary structure																																																																					.		.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.		.	.	.	.	.	160	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R	G	Y	Q	V
Query Conservation
Alig confidence															.	.	.								.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.								.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	G	F	G	A	K	V	I	T	Y	D	I	.	.	.	F	R	N	P	E	L	E	.	.	.	.	.	.	.	.	.	.	.	K	K	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I
Template Known Secondary structure					T	T								S	.	.	.	S							.	.	.	.	.	.	.	.	.	.	.		T	T		B		S										S						S				G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure															.	.	.								.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.														.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		N	D	E	S	I	A	K	M	.	K	Q	D	V	V	I
Template Known Secondary structure		S							S	.		T	T
Template Predicted Secondary structure										.
Template SS confidence
		218	.	220	.	.	.	.	.		.	.	.	.	230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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