Job Description P06960 Confidence 97.25% Date Thu Jan 5 10:59:30 GMT 2012 Rank 68 Aligned Residues 144 % Identity 18% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.																					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	L	A	Q	Y	A	G	V	P	V	W	N	G	L	T	N	E	F	H	P	T	.	.	Q	L	L	A	D	L	M	T	M	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S
Query Conservation																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.		.
Template Conservation																																																																									.		.
Template Sequence		L	D	A	C	K	A	R	G	I	K	V	G	N	A	P	H	G	V	T	V	A	T	A	E	I	A	M	L	L	L	L	G	S	A	R	R	A	G	E	G	E	K	M	I	R	T	R	S	W	P	G	W	E	P	L	E	L	V	G	E	K	L	D	N	K	T	L	G	I	Y	G	.	F	.	G	S	I	G	Q	A
Template Known Secondary structure								T	T									S																		T	T										T	T							T	T	T	T						T	T								.		.	S
Template Predicted Secondary structure																																																																									.		.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.		.	.	.	.	160	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D	F	I	Y	T	D	V	W	V	S	M	G	E	A	K	E	K	W	A	E	R	I	A	L	L	R
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	K	R	A	Q	G	F	D	M	D	I	D	Y	F	D	T	H	R	A	S	S	S	D	E	A	S	.	.	.	.	.	.	.	.	.	.	.	Y	Q	A	T	F	H	D	S	L	D	S	L	L	S	V	S	Q	F	F	S	L	N	A	P	S	T	P	E	T	R	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	T								S	S										.	.	.	.	.	.	.	.	.	.	.		T					S	S									S										T	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	Q	V	N	A	Q	M	M	A	L	T	D	N	P	N	V	K	F	L	H	C	L	P	A	F	H	D	D	Q	T	T	L	G	K	Q	M	A	K	E	F	D	L	H	G	G	M	E	V	T	D	E	V	F
Query Conservation
Alig confidence		.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	F	F	N	K	A	T	I	K	S	L	.	P	Q	G	A	I	V	V	N	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	D	L	V	D	N	E	L	V
Template Known Secondary structure		.	.		B	S					T	T	S	.		T	T							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	B
Template Predicted Secondary structure		.	.											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.																						240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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