Job Description P06960 Confidence 94.92% Date Thu Jan 5 10:59:30 GMT 2012 Rank 116 Aligned Residues 188 % Identity 19% Template c1a4iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		F	L	K	L	L	D	F	T	P	A	Q	F	T	S	L	L	T	L	A	A	Q	L	K	A	D	K	K	N	G	K	E	V	Q	K	L	T	G	K	N	I	A	L	I	F	E	K	D	S	T	R	T	R	.	C	S	F	E	V	A	A	F	D	Q	G	A	R	V	T	Y	L	G	P	S	G	S	Q	I	G	H	K
Query Conservation																																																						.
Alig confidence																																			.	.	.	.	.															.																										.	.
Template Conservation																																			.	.	.	.	.																																									.	.
Template Sequence		I	L	N	G	K	E	I	S	A	Q	I	R	A	R	L	K	N	Q	V	T	Q	L	K	E	Q	V	P	G	F	T	P	R	L	.	.	.	.	.	A	I	L	Q	V	G	N	R	D	D	S	N	L	Y	I	N	V	K	L	K	A	A	E	E	I	G	I	K	A	T	H	I	K	L	P	R	T	T	T	E	.	.
Template Known Secondary structure																											S	T	T						.	.	.	.	.						S																				T										T	T				.	.
Template Predicted Secondary structure																																			.	.	.	.	.																																									.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.								.	.	.	.	.		.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure															.	.														.	.	.	.										.	.	.	.	.	.	.						.			.	.	.	.	.	.
Query SS confidence															.	.														.	.	.	.										.	.	.	.	.	.	.						.			.	.	.	.	.	.
Query Sequence		E	S	I	K	D	T	A	R	V	L	G	R	M	.	.	Y	D	G	I	Q	Y	R	G	H	G	Q	E	V	.	.	.	.	V	E	T	L	A	Q	Y	A	G	.	.	.	.	.	.	.	V	P	V	W	N	.	G	L	.	.	.	.	.	.	T	N	E	F	H	P	T	Q	L	L	A	D	L	M	T	M	Q	E
Query Conservation															.	.														.	.	.	.										.	.	.	.	.	.	.						.			.	.	.	.	.	.
Alig confidence															.	.														.	.	.	.										.	.	.	.	.	.	.						.			.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	V	M	K	Y	I	T	S	L	N	E	D	S	T	V	H	G	F	L	V	Q	L	P	L	D	S	E	N	S	I	N	T	E	E	V	I	N	A	I	A	P	E	K	D	V	D	G	L	T	S	I	N	A	G	R	L	A	R	G	D	L	N	D	C	F	I	P	C	T	P	K	G	C	L	E	L	I	K	E
Template Known Secondary structure															T	T								S	S				S	S										T	S		G	G	G	B	T	T			S									T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	P	G	K	A	F	N	E	M	T	L	V	Y	A	G	D	A	R	N	N	M	G	N	S	M	L	E	A	A	A	L	T	G	L	D	L	R	L	L	A	P	K	A	C	W	P	E	E	S	L	V	A	E	C	S	A	L	A	E	K	H	G	G	K	I	T	L	T	E	D	V	A	A	G	V	K	G	A	D
Query Conservation
Alig confidence			.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	.	.	G	V	P	I	A	G	R	H	A	V	V	V	G	R	S	.	K	I	V	G	A	P	M	H	D	L	L	L	W	N	N	A	T	V	T	T	C	H	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	H	L	D	E	E	V	N	K	G	D
Template Known Secondary structure		T	.	.					T	T										.	T	T	T											T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S						T	T		S
Template Predicted Secondary structure			.	.																.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																										.	200	.	.	.	.	.	.	.	.	.	210
		228	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions