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Job DescriptionP75897
Confidence100.00%DateThu Jan 5 12:15:48 GMT 2012
Rank18Aligned Residues177
% Identity23%Templatec3o93A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nicotinamidase; PDBTitle: high resolution crystal structures of streptococcus pneumoniae2 nicotinamidase with trapped intermediates provide insights into3 catalytic mechanism and inhibition by aldehydes
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
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Query Sequence  QSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALK
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Template Sequence  TKALISIDYTEDFVADSGKLT. . . . AGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFH. . . . . . . . . . . . . . .
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BSTT
TT
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TTTT

B
TT
TT
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Query Sequence  TMRKQPQLQGKLLAKGSWDYQL. . . . . . . VDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVES
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Template Sequence  . . . PESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDIVL. H
Template Known Secondary structure  ...GGGGTS


SBTTSGGGSB
TTTSTTSSSSSSTTSSTT


TT

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   63......70.........80.........90.........100.........110.........120.........130....... .
 
   170.........180.........190.........200.........210.......
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Query Sequence  TLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETF
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Template Sequence  TAIDAYNLGYDIEIVKPAVASIWPE. NHQFALGHFKNTLGAKLVDENL
Template Known Secondary structure  TT

SS.TS


TTS
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   140.........150.........160.... .....170.........180......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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