Job Description P75897 Confidence 100.00% Date Thu Jan 5 12:15:48 GMT 2012 Rank 21 Aligned Residues 192 % Identity 22% Template c2h0rD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:nicotinamidase; PDBTitle: structure of the yeast nicotinamidase pnc1p Resolution 2.90 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	I	V	V	D	M	Q	N	A	Y	A	T	P	G	G	Y	L	D	L	A	G	F	D	V	S	T	T	R	P	V	I	A	N	I	Q	T	A	V	T	A	A	R	A	A	G	M	L	I	I	W	F	Q	N	G	W	D	E	Q	Y	V	E	A	G	G	P	G	S	P	N	F	H	K	S	N	A	L	K	T
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		K	T	L	I	V	V	D	M	Q	N	D	F	I	S	P	L	G	S	L	.	.	.	.	.	T	V	P	K	G	E	E	L	I	N	P	I	S	D	L	M	Q	D	A	D	R	D	W	H	R	I	V	V	T	R	D	W	H	P	S	R	H	I	S	F	A	K	N	H	K	D	K	E	P	Y	S	T	Y	T	Y	H
Template Known Secondary structure										B					S	T	T	S	T	T	.	.	.	.	.			T	T	G	G	G	G											G	G	G												B		T	T		T	T	B	G	G	G	S	T	T			T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		98	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.													.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	K	Q	P	Q	L	.	.	.	.	.	.	.	Q	G	K	L	L	A	K	G	S	W	D	Y	Q	L	V	D	E	L	V	P	.	.	.	Q	P	G	D	I	V	L	P	K	.	.	.	.	.	.	.	.	.	.	.	.	P	R	Y	S	G	F	F	N	T	P	L	D	S	I	L	R	S	R	G	I	R	H
Query Conservation									.	.	.	.	.	.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																					.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	R	P	G	D	D	S	T	Q	E	G	I	L	W	P	V	H	C	V	K	N	T	W	G	S	Q	L	V	D	Q	I	M	D	Q	V	V	T	K	H	I	K	I	V	D	K	G	F	L	T	D	R	E	Y	Y	S	A	F	H	D	I	W	N	F	H	K	T	D	M	N	K	Y	L	E	K	H	H	T	D	E
Template Known Secondary structure				S	S	S										B		S			B	T	T	S	G	G	G	S	B												T									S	T	T					S	S	S	B		T	T	S		S	B		S								T	T		S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	V	F	T	G	I	A	T	N	V	C	V	E	S	T	L	R	D	G	F	F	L	E	Y	F	G	V	V	L	E	D	A	T	H	Q	A	G	P	K	.	F	A	Q	K	A	A	L	F	N	I	E	T	F	F	G	W	V	S	D	V
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		V	Y	I	V	G	V	A	L	E	Y	C	V	K	A	T	A	I	S	A	A	E	L	G	Y	K	T	T	V	L	L	D	Y	T	R	P	I	S	D	D	P	E	V	I	N	K	V	K	E	E	L	K	A	H	N	I	N	V	V	D	K
Template Known Secondary structure									T	T	T												T	T													S	S			T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions