Job Description P16689 Confidence 99.36% Date Thu Jan 5 11:35:39 GMT 2012 Rank 98 Aligned Residues 292 % Identity 15% Template d2fvka2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.40

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	.	.	.	.	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G
Query Conservation																																																	.	.	.	.
Alig confidence																.	.	.	.	.																													.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		G	G	I	D	A	H	V	H	V	D	E	P	L	K	.	.	.	.	.	L	L	G	D	V	V	D	T	M	E	H	A	T	R	S	A	V	A	G	G	T	T	T	V	V	A	F	S	T	Q	D	V	S	K	K	G	P	S	A	L	A	E	S	V	K	L	D	V	D	E	Y	S	E	Q	T	L	Y	C	D	Y	G
Template Known Secondary structure								B					T	T		.	.	.	.	.	T	T	S			S													T	T												T	T			S	T	T														T	T	S			S	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.
Query Sequence		V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	.	.	.	.	.	.	.	.	.	M	Q	Q	Y
Query Conservation																																																																					.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	L	I	L	F	Q	I	E	K	P	S	V	E	A	R	E	L	L	D	V	Q	L	Q	A	A	Y	N	D	Y	G	V	S	S	V	M	F	M	T	Y	P	G	L	Q	I	S	D	Y	D	I	M	S	A	M	Y	A	T	R	K	N	G	F	T	T	M	L	H	A	E	N	G	D	M	V	K	W	M	I	E	A
Template Known Secondary structure											S	S																							B			B	S	S	S	T	T	T	B																T	T		B				B
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		197	.	.	200	.	.	.	.	.	.	.	.										.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		E	E	E	Q	L	A	L	A	A	R	W	S	.	.	.	.	.	.	.	.	.	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	D	D	A	T	H	A	.	.	.	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G
Query Conservation														.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		L	E	E	Q	G	L	T	D	A	Y	Y	H	G	V	S	R	P	S	I	V	E	G	E	A	T	N	R	A	I	T	L	A	T	T	M	D	T	P	I	L	F	V	H	V	S	S	P	Q	A	A	E	V	I	K	Q	A	Q	T	K	G	L	K	V	Y	A	E	T	C	P	Q	Y	A	L	L	S	D	A	I	T	R
Template Known Secondary structure					T	T			S	T	T					T	S																			T	T							S																	T																G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		265	.																						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	H	G	V	G	I	D	L	S	S	I	S	E	S	P	F	T	N	P	D	D	R	F	I	G	S	K	Y	I	C	S	P	P	I	R	P	E	G	T	Q	K	S	I	W	K	G	M	N	N	G	T	F	T	I	V	G	S	D	H	C	S	Y	N	Y	Y	E	K	T	S	T	A	S	K	H	R	A	F	D	P	E
Template Known Secondary structure						S			G	G	G	S	S	S	S	T	T	T		T	T		T	T	G	G	G	G	G			S	S					T	T	S											T	S		S						B				B	S	S			S	S	T	T	B	G	G	G	G			G	G
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
															303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	.	.	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																								.
Template Conservation
Template Sequence		N	N	K	N	G	E	F	R	Y	I	P	N	G	L	P	G	V	C	T	R	M	P	L	L	Y	D	Y	G	Y	L	R	G	N	L	T	S	M	M	K	L	V	E	I	Q	C	T	N	P	A	K	V	Y	G	M	Y	P	Q	K	G	S
Template Known Secondary structure		G	T			S		G	G	G	S				B			T	T	T									T	T	T	T	T	S	S	S										T							T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions