Job Description P16689 Confidence 99.49% Date Thu Jan 5 11:35:39 GMT 2012 Rank 87 Aligned Residues 275 % Identity 15% Template d1yrra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.00

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A
Query Conservation
Alig confidence																								.																																														.
Template Conservation																								.																																														.
Template Sequence		G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	.	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	.	H	P	N	Q	A	L	G	L	H	L	E
Template Known Secondary structure									S			T	T			S	S	S	S	T	T	T	S	.	S														T	T																														.		T	T	S	B
Template Predicted Secondary structure																								.																																														.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.
		130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure							.	.	.	.	.																																																.	.	.	.
Query SS confidence							.	.	.	.	.																																																.	.	.	.
Query Sequence		E	H	R	L	H	.	.	.	.	.	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	.	.	.	.	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q
Query Conservation							.	.	.	.	.																																																.	.	.	.
Alig confidence							.	.	.	.	.																						.	.																									.	.	.	.
Template Conservation																																	.	.
Template Sequence		G	P	W	L	N	L	V	K	K	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	.	.	D	V	I	T	K	V	T	L	A	P	E	M	V	P	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S	N	A	T	L	K	E	A	K	A	G	F	R	A	G
Template Known Secondary structure			S	S				S						S		S															T	T	.	.	T	T								G	G	G	S											T	T							S															T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure													.	.	.	.	.	.	.																						.	.	.
Query SS confidence													.	.	.	.	.	.	.																						.	.	.
Query Sequence		L	A	L	A	A	R	W	S	Q	P	N	.	.	.	.	.	.	.	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	D	D	A	.	.	.	T	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G
Query Conservation													.	.	.	.	.	.	.																						.	.	.
Alig confidence													.	.	.	.	.	.	.																						.	.	.														.
Template Conservation																																																									.
Template Sequence		I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	.	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G
Template Known Secondary structure						S	S	T	T	T	T	S					S	S												T	T								S	S	S	S	S													G	.	G	G							B		T	T	T	T	S			S					T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.
Predicted Secondary structure																																																				.																									.
Query SS confidence																																																				.																									.
Query Sequence		A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	.	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G
Query Conservation																																																				.																									.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																									.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	Y	Y	R	N	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G
Template Known Secondary structure								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T						B																											T							T	T		T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.																	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions