Return to main results Retrieve Phyre Job Id

Job DescriptionP16689
Confidence99.49%DateThu Jan 5 11:35:39 GMT 2012
Rank86Aligned Residues237
% Identity15%Templated1xrta2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain
Resolution1.61

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRA
Query Conservation 



 
 
                              
 
                                       
Alig confidence 














........
























































Template Conservation 



 
 
       ........  

       
   




                                     
Template Sequence  GFIDIHVHLRDPGQT. . . . . . . . YKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTI
Template Known Secondary structure 



TTT
T........TT

TT
S
SSS
S
S
SS
B
S
Template Predicted Secondary structure 









........





















Template SS confidence 















































































   56...60.........70 .........80.........90.........100.........110.........120.......
 
   130.........140.........150.........160.........170.........180.........190.........200.........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  EHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQ
Query Conservation                                                                                  
Alig confidence 

























...............................................






Template Conservation                    
       ...............................................       
Template Sequence  TKGRKGKEIADFYSLKEAGCVAFTDD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GSPVMDS
Template Known Secondary structure  BGGG
SSSB

T


B

T...............................................TS



Template Predicted Secondary structure 









...............................................





Template SS confidence 















































































   128.130.........140.........150... ......160
 
   210.........220.........230. ........240........ .250.........260.........270.....
Predicted Secondary structure 



..........




....













Query SS confidence 





















. . . . . . . . . .
















. . . .


























Query Sequence  PNRESIAALCRARKIALASHDD. . . . . . . . . . ATHAHVAESHQLGSVIA. . . . EFPTTFEAAEASRKHGMNVLMGAPNIV
Query Conservation                        ..........                 ....               
           
Alig confidence 





















..........
















....


























Template Conservation 
        
      
  
                               
                
  
        
Template Sequence  SVMRKALELASQLGVPIMDHCEDDKLAYAEEIQIARDGILAQRTGGHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNH
Template Known Secondary structure  T



GGGGT



S


STT


GGG
Template Predicted Secondary structure 





















Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   276...280.........290.........300....... ..310.........320.........330.........340.....
Predicted Secondary structure 
















......










Query SS confidence 































. . . . . .





































Query Sequence  RGGSHSGNVAASELAQLGLLDILSSDYYPASL. . . . . . LDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRG
Query Conservation                   
     


      ......              

  


   
   
  

    
Alig confidence 


...

























......

































.


Template Conservation     ...        
  
      

                         

    
    
 
 

 


.
 
Template Sequence  LLE. . . DRLALIEGVKRGIIDCFATDHAPHQTGIIGLQTALPSALELYRKGIISLKKLIEMFTINPARIIGV. DLG
Template Known Secondary structure  G

...
T
S



B








GGGTTSS
TT
.S

Template Predicted Secondary structure 

...























.


Template SS confidence 











































































   261.. ......270.........280.........290.........300.........310.........320......... 330..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions