Job Description P16689 Confidence 97.09% Date Thu Jan 5 11:35:39 GMT 2012 Rank 140 Aligned Residues 268 % Identity 13% Template c3rhgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phophotriesterase; PDBTitle: crystal structure of amidohydrolase pmi1525 (target efi-500319) from2 proteus mirabilis hi4320 Resolution 1.53 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																																	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	T	L	P	H	E	H	L	F	N	D	L	S	G	V	V	D	E	P	F	Y	E	F	S	H	V	L	V	D	K	K	V	S	A	D	I	Q	W	G	L	K	Y	D	P	Y	C	C	C	D	N	M	D	K	K	P	I	E	D	V	I	F	E	L	N	N	F	K	E	L	G	G	K	T	I	V	D	A	T	G
Template Known Secondary structure										S	S				G	G	G						S	T	T	G	G	G	G	T	T	S				G	G	G					T	T		G	G	G						S																	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	.	.	.	.	.	.	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q
Query Conservation																																																												.	.	.	.	.	.
Alig confidence																			.															.																										.	.	.	.	.	.
Template Conservation																			.															.
Template Sequence		S	S	S	I	G	R	D	I	R	K	L	K	Q	V	A	E	L	.	T	G	I	N	V	V	A	S	S	G	L	Y	I	E	.	K	F	E	G	K	R	L	A	D	D	I	D	A	M	A	K	M	I	D	D	E	L	N	I	G	I	D	G	T	D	I	R	A	G	M	I	G	E	I	G	V	S	P	F	F	T	D
Template Known Secondary structure		S	G	G	G	T													.															.				G	G	G	G	G	S															T		S	T	T	S	S													T	T
Template Predicted Secondary structure																			.															.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.				.	.	.	.	.	.	.	.	240
Predicted Secondary structure																															.								.	.	.																				.	.	.	.						.	.	.
Query SS confidence																															.								.	.	.																				.	.	.	.						.	.	.
Query Sequence		F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	.	L	A	L	A	A	R	W	.	.	.	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	.	.	.	.	A	S	H	D	D	.	.	.	A	T	H	A	H	V	A	E	S
Query Conservation																															.								.	.	.																				.	.	.	.						.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.													.								.	.	.																				.	.	.	.						.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	K	N	S	.	.	.	.	.	.	.	.	.	.	.	.	L	R	A	A	A	L	A	Q	N	N	N	P	Y	A	S	M	N	I	H	M	P	G	W	Q	R	R	G	D	E	V	L	D	I	L	L	T	E	M	G	C	D	P	A	K	I	S	L	A	H	S	D	P	S	G	K	D	I	D	Y	Q	C	K	M
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.									T	T		T	T									T	T	S											T	T	T	T				G	G	G				S			G	G	G	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.																.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	.	.	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.																.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																												.	.																.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	R	G	V	W	L	E	F	D	M	I	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	I	S	F	P	K	E	G	A	A	P	S	V	M	D	T	V	E	A	V	A	T	L	I	E	R	G	Y	G	N	Q	I	V	L	S	H	D	V	F	L	K	Q	M	W	A	K	N	G	G	N	G	W	G	F
Template Known Secondary structure				T	T								T	T			.	.	.	.	.	.	.	.	.	.	.	.		B		S	S	S		B																	T	T		G	G	G									S	G	G	G	S	G	G	G	T	S		T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.													.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	P	N	V	F	L	S	L	L	A	Q	R	G	I	D	K	T	I	I	D	K	L	C	I	D	N	P	A	N	L	L	A	A	E	N
Template Known Secondary structure					T								T	T										T	T									S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions