Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 25 Aligned Residues 349 % Identity 15% Template c3lnpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure															.	.	.	.	.																						.	.	.
Query SS confidence															.	.	.	.	.																						.	.	.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	.	.	.	.	.	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	Q	S	.	.	.	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P
Query Conservation															.	.	.	.	.																						.	.	.
Alig confidence															.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		L	R	I	N	S	H	W	I	I	P	I	E	N	T	V	S	N	I	L	I	D	H	C	L	L	I	K	D	G	I	I	L	A	I	E	P	Q	S	S	C	Q	I	P	A	T	E	T	L	D	L	G	Q	Q	V	L	X	P	G	W	V	N	A	H	G	H	A	A	X	S	L	F	R	G	L	A	D	D	L	P	L
Template Known Secondary structure												S	S					S											T	T								T	T	T													S											S			G	G	G	G	G	G	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																						73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		X	T	W	L	Q	E	H	V	W	P	A	E	A	Q	H	V	D	E	H	F	V	K	Q	G	T	E	L	A	I	A	E	X	I	Q	S	G	T	T	T	F	A	D	X	Y	F	Y	P	Q	Q	S	G	E	A	.	.	.	.	.	.	.	A	L	A	A	G	I	R	A	V	C	F	A	P	V	L	D	F	P	T	N
Template Known Secondary structure								T										S																		T	T									S									.	.	.	.	.	.	.					T											S	S			S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	.	.	.	.	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		Y	A	Q	N	A	D	E	Y	I	R	K	A	I	E	C	N	D	R	F	N	N	H	P	X	N	E	Q	G	L	V	Q	I	G	F	G	P	H	A	P	Y	T	V	S	D	E	P	L	K	E	I	T	X	L	S	D	Q	L	D	X	P	V	Q	I	H	L	H	E	T	D	F	E	V	S	E	S	L	E	T	F	N
Template Known Secondary structure		S		S	S																	S		G	G	G	T	T												T	T	T	S																T								S		S												S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	.	D	D	A	T	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S
Query Conservation																							.
Alig confidence																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	P	T	Q	R	L	A	D	I	G	F	L	N	E	R	V	S	C	V	H	X	T	Q	V	D	D	G	D	I	K	I	L	Q	K	T	G	A	S	I	I	H	C	P	E	S	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	A	S	G	F	C	P	I	A
Template Known Secondary structure		S									T	T			S	T	T								S																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																							.	.	310	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	.	.	.	.	.	.	.	.	.	.	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I	G	E	G	K	R	A	D	L	V
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		K	L	S	A	A	N	I	P	L	A	I	G	T	D	G	A	A	S	N	N	D	L	D	X	F	S	E	T	K	T	A	A	L	L	A	K	G	V	S	Q	D	A	S	A	I	P	A	I	E	A	L	T	X	A	T	L	G	G	A	R	A	L	G	I	D	D	I	T	G	S	L	K	P	G	K	A	A	D	I	Q
Template Known Secondary structure						T	T										T	T	S	S																					T		T	T	S	S										T							T	T		T	T	T	S	S	S			T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.																		.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	H	R	K	D	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	D	L	N	T	L	S	S	Q	P	V	F	D	P	V	S	H	X	V	Y	C	T	K	S	T	Q	V	S	H	V	W	V	N	G	R	C	L	L
Template Known Secondary structure							S	G	G	G		S		S									S			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low