Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 50 Aligned Residues 315 % Identity 18% Template c3la4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:urease; PDBTitle: crystal structure of the first plant urease from jack bean (canavalia2 ensiformis) Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.															.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		T	V	I	T	N	A	V	I	I	D	Y	T	G	I	I	K	A	D	I	G	I	K	D	G	L	I	A	S	I	G	K	A	G	N	P	D	I	M	N	G	V	F	S	N	M	I	I	G	A	N	T	E	V	I	A	G	E	G	L	I	V	T	A	G	A	I	D	C	H	V	H	Y	I	C	.	.	.	.	.	.
Template Known Secondary structure												T	T											T	T									B		T	T	T		S	S			T	T	S	B			T	T							T	T															S		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	V	D	W	P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	Q	L	V	Y	E	A	I	S	S	G	I	T	T	L	V	G	G	G	T	G	P	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	T	T	C	T	P	S	P	T	Q	M	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T										T									S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.																															.	.	440	.	.	.	.	.	.	.	.	.	450	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	L	Q	S	T	D	D	L	P	L	N	F	G	F	T	G	K	G	S	S	S	K	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	E	I	I	K	A	G	A	M	G	L	L	H	E	D	W	G	S	T	P	A	A	I	D	N	C	L	T	I	A	E	H	H	D	I	Q	I
Template Known Secondary structure							T	T	T	S	S	S					B						S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		S	B			B	T	T	T																		T		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.																	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		227	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	H	D	D	A	T	.	.	.	.	.	.	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	.	.	.	.	.	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.	.	.	.	.																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																			.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	H	T	D	T	L	N	E	A	G	F	V	E	H	S	I	A	A	F	K	G	R	T	I	H	T	Y	H	S	E	G	A	G	G	G	H	A	P	D	I	I	K	V	C	G	I	K	N	V	L	P	S	S	T	N	P	T	R	P	L	T	S	N	T	I	D	E	H	L	D	M	L	M	V	H	H	L	D	R
Template Known Secondary structure				B			T	T		S	S											T	T						T	T	T	T	S	T	T	S		S	T	T	T	G	G	G	G	G	G		T	T							S	T	T	S	S		B	T	T																T
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
														278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.																		.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	R	F	T	L	P	Q	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	P	E	D	L	A	F	A	H	S	R	I	R	K	K	T	I	A	A	E	D	V	L	N	D	I	G	A	I	S	I	I	S	S	D	S	Q	A	M	G	R	V	G	E	V	I	S	R	T	W	Q	T	A	D	K	M	K	A	Q	T	G	P	L	K	C	D	S	S	D	N	D	N	F	R	I	R	R	Y	I
Template Known Secondary structure		T	S											S														T	T	S	S							T	T	S	S	S		G	G	G																		S		T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		A	K	Y	T	I	N	P	A	I	A	N	G	F	S	Q	Y	V	G	S	V	E	V	G	K	L	A	D	L	V	M	W	K	P	S	F	F	G	T	K	P	E	M	V	I	K	G	G	M	V	A	W
Template Known Secondary structure		T	T	T	T								T		T	T	T	S	S	S	S		T	T	S	B								G	G	G	T	T	T			S					T	T
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.