Job Description P16689 Confidence 96.80% Date Thu Jan 5 11:35:39 GMT 2012 Rank 141 Aligned Residues 271 % Identity 13% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.																																	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	I	E	L	H	T	D	N	L	D	K	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	T	L	X	H	E	H	L	Q	N	D	C	R	C	W	W	N	P	P	Q	E	P	E	R	Q	Y	L	A	E	A	P	I	S	I	E	I	L	S	E	L	R	Q	D	P	F	V	N	K	H	N	I	A	L	D	D	L	D	L	A	I	A	E	V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	T	C
Template Known Secondary structure			S			S	S			S	S				G	G	G						S	G	G	G	T					S				G	G	G						T		G	G	G		T	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	.	.	.	.	.	.	.	L	V	S	L	M	D	H	S	P	G	Q	R
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																		.	.																																												.	.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		R	G	I	G	R	D	P	V	K	L	R	R	I	S	A	E	.	.	T	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D	E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S	D	F	T	A
Template Known Secondary structure		B	T	T	T													.	.										S	B			G	G	G			G	G	G	G	T																T		B	T	T	B	S				S	S								T	T
Template Predicted Secondary structure																		.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																								.	.																	.	.	.	.									.	.	.
Query SS confidence																																								.	.																	.	.	.	.									.	.	.
Query Sequence		Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	.	.	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	.	.	.	.	A	L	A	S	H	D	D	A	.	.	.	T	H	A	H	V	A	E	S	H
Query Conservation																																								.	.																	.	.	.	.									.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																	.	.	.	.									.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	E	K	S	L	R	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V	L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S													T	T			G	G	G							G	G	G	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.														.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.											.	.	.	.	.	.
Predicted Secondary structure																																																						.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	.	.	L	L	D	I	L	S	S	D	Y	Y	.	.	.	.	.	.	.	.	.	.	P	A	S	L	L	D
Query Conservation																																																						.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																															.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	G	A	F	L	E	F	D	X	I	.	.	.	.	.	.	.	.	.	.	.	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y	G	G	N	G	Y	A	F	V
Template Known Secondary structure				T								T	.	.	.	.	.	.	.	.	.	.	.	T						T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G	T	S		T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.												.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	H	F	L	P	R	L	R	R	H	G	L	D	D	A	A	L	E	T	L	X	V	T	N	P	R	R	V	F	D	A	S	I	E	G	H
Template Known Secondary structure												T	T											T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions