Phyre 2 alignment of P16689 with c3ipwA

Job Description P16689
Confidence 92.72% Date Thu Jan 5 11:35:39 GMT 2012

Rank 150 Aligned Residues 248

% Identity 12% Template c3ipwA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:hydrolase tatd family protein; PDBTitle: crystal structure of hydrolase tatd family protein from entamoeba2 histolytica

Resolution 1.95 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E
Query Conservation
Alig confidence																																																.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence	F	I	D	I	G	A	N	L	T	D	D	N	Y	F	G	N	Y	H	G	K	H	Y	H	E	E	D	I	D	V	V	L	Q	R	A	E	R	N	G	L	S	H	I	I	I	T	S	G	.	.	.	.	.	C	L	N	D	F	K	K	A	I	E	I	I	N	K	Y	Q	N	L	T	N	I	K	L	V	T	T	I	G
Template Known Secondary structure								T	T	S	G	G	G	G	T			T	T				S														T	T										.	.	.	.	.	S															G	G	G		S	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

	131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	H	P	T	R	T	N	E	L	K	Q	E	G	Y	L	D	E	L	L	L	L	C	E	K	N	I	D	K	V	V	A	I	G	E	I	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	R	L	Q	F	S	D	K	E	T	Q	L	S
Template Known Secondary structure			G	G	G	G	G	G	G	G	S	T	T												T	G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																													.	.	120	.	.	.	.	.	.	.	.	.	130	.

	211	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.							.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure													.																						.	.	.	.	.	.
Query SS confidence													.																						.	.	.	.	.	.
Query Sequence	N	R	E	S	I	A	A	L	C	R	A	R	.	K	I	A	L	A	S	H	D	D	A	T	H	A	H	V	A	E	S	H	Q	L	.	.	.	.	.	.	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N
Query Conservation													.																						.	.	.	.	.	.
Alig confidence													.																						.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence	G	Y	R	T	L	S	I	L	H	Q	K	Y	P	Y	L	P	F	F	F	H	C	R	K	S	W	S	D	L	C	Q	L	N	K	E	L	G	Y	N	G	C	K	G	V	V	H	C	F	D	G	T	E	E	E	M	N	Q	I	L	N	E	G	W	D	I	G	V	T	G	N	S	L	.	.	.	.	.	.	.	Q	S
Template Known Secondary structure					T								T	T									S												T	T		T	T	S						S														T	T							S	G	G	G	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
	132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.

	284	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.																																			310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.
Predicted Secondary structure													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence	V	A	A	S	E	L	A	Q	L	G	L	L	.	.	.	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	R	V	A	D	D	Q	S	.	N	R	F	T	L	P
Query Conservation													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence										.			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation										.
Template Sequence	I	E	L	L	N	V	M	K	Q	.	I	P	I	E	R	L	H	I	E	T	D	C	P	Y	C	G	I	K	K	T	S	A	G	F	K	Y	L	K	E	K	D	F	G	V	K	V	E	K	Y	Q	R	N	K	Y	V	Q	R	R	N	E	P	S	N	I	I	D	I	A	I	I	M	S	S	I	K	H	I	S	L	F
Template Known Secondary structure								T	T	.	S		G	G	G							T	T	S					T	T	S	G	G	G	G	G		S	S					B		G	G	G			T	T	S		B	T	T				G	G	G													T
Template Predicted Secondary structure										.
Template SS confidence
	205	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

	326	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	F	V	N	K	V	Y	S	N	S	M	N	M	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	284	.	.	.	.	.	290	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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