Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 21 Aligned Residues 361 % Identity 15% Template c3griB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: the crystal structure of a dihydroorotase from staphylococcus aureus Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	.	.	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S
Query Conservation																																.	.
Alig confidence																																.	.																																							.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.
Template Sequence		L	I	K	N	G	K	V	L	Q	N	G	E	L	Q	Q	A	D	I	L	I	D	G	K	V	I	K	Q	I	A	P	A	I	E	P	S	N	G	V	D	I	I	D	A	K	G	H	F	V	S	P	G	F	V	D	V	H	V	H	L	R	E	P	G	G	E	Y	K	E	T	I	.	.	.	.	.	.	.	.	E	T
Template Known Secondary structure											T	T											T	T							T	T					T	T							T	T																T	T	T		T	T	T				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		G	T	K	A	A	A	R	G	G	F	T	T	V	C	P	X	P	N	T	R	P	V	P	D	S	V	E	H	F	E	A	L	Q	K	L	I	D	D	N	A	Q	V	R	V	L	P	Y	A	S	I	T	T	R	Q	L	G	K	E	L	V	D	.	.	.	.	.	.	.	F	P	A	L	V	K	E	G	A	F	A	F
Template Known Secondary structure									T	T								S		S	S	S		S		S																S	S								S	B	G	G	G		S	S	S	B			.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	D	G	V	G	V	Q	T	A	S	X	X	Y	E	G	X	I	E	A	A	K	V	N	K	A	I	V	A	H	C	E	D	N	S	L	I	Y	G	G	A	X	H	E	G	K	R	S	K	E	L	G	I	P	G	I	P	N	I	C	E	S	V	Q	I	A	R	D	V	L	L	A	E	A	A	G	C	H	Y	H
Template Known Secondary structure					S	S				S														T	T										G	G	G		T	T		S			S	S							T						T																		T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		S	H	D	D	A	T	H	A	H	V	A	E	S	H	Q	L	.	.	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		V	C	H	V	S	T	K	E	S	V	R	V	I	R	D	A	K	R	A	G	I	H	V	T	A	E	V	T	P	H	H	L	L	L	T	E	D	D	I	P	G	N	N	A	I	Y	K	X	N	P	P	L	R	S	T	E	D	R	E	A	L	L	E	G	L	L	D	G	T	I	D	C	I	A	T	D	H	A	P	H
Template Known Secondary structure				S																T	T																G	G	G			S	S		G	G	G			S	S																		T	S	S							B
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		306	.																				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Query Sequence		S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	G	V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.																						.	.	.
Template Conservation																																																									.
Template Sequence		A	R	D	E	K	A	Q	P	X	E	K	A	P	F	G	I	V	G	S	E	T	A	F	P	L	L	Y	T	H	F	V	K	N	G	D	W	T	L	Q	Q	L	V	D	Y	L	T	I	K	P	C	E	T	F	N	L	.	E	Y	G	T	L	K	E	N	G	Y	A	D	L	T	I	I	D	L	D	S	E	Q	E	I
Template Known Secondary structure							S	S		T	T	T	S							T	T	T										T	T	S	S	S											T								T		.	S		S				T	T	S	B								S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
																					364	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	E	D	F	L	S	K	A	D	N	T	P	F	I	G	Y	K	V	Y	G	N	P	I	L	T	X	V	E	G	E	V	K	F
Template Known Secondary structure			G	G	G			S	S					T	T	T	T				S									T	T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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