Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 13 Aligned Residues 359 % Identity 15% Template c3gnhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:l-lysine, l-arginine carboxypeptidase cc2672; PDBTitle: crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from2 caulobacter crescentus cb15 complexed with n-methyl phosphonate3 derivative of l-arginine. Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.
Predicted Secondary structure														.	.	.																				.	.	.																																							.	.	.	.
Query SS confidence														.	.	.																				.	.	.																																							.	.	.	.
Query Sequence		I	I	N	N	V	K	L	V	L	E	N	E	.	.	.	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	.	.	.	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	.	.	.	.	W
Query Conservation														.	.	.																				.	.	.																																							.	.	.	.
Alig confidence														.	.	.																				.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		A	V	S	A	A	R	L	L	D	V	A	S	G	K	Y	V	D	N	P	L	V	I	V	T	D	G	R	I	T	S	I	G	K	K	G	D	A	V	P	A	G	A	T	A	V	D	L	P	G	V	T	L	L	P	G	L	I	D	M	H	V	H	L	D	S	L	A	E	V	G	G	Y	N	S	L	E	Y	S	D	R
Template Known Secondary structure											T	T	T	T					S							T	T								T	T	S				T	T																						T	T			T	T			S	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		F	W	S	V	V	Q	T	A	N	A	K	K	T	L	E	A	G	F	T	T	V	R	N	V	G	A	A	D	Y	D	D	V	G	L	R	E	A	I	D	A	G	Y	V	P	G	P	R	I	V	T	A	A	I	S	F	G	A	T	G	G	H	C	D	S	T	F	F	P	P	S	M	D	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T										S	T	T											T	T	S	S										S			B	S	T	T	S	T	T	S			S	S		G	G	G		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	D	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Q	K	N	P	F	N	S	D	S	P	D	E	A	R	K	A	V	R	T	L	K	K	Y	G	A	Q	V	I	I	C	A	T	G	G	V	F	S	R	G	N	E	P	G	Q	Q	Q	L	T	Y	E	E	M	K	A	V	V	D	E	A	H	M	A	G	I	K	V	A	A	H	A	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				T	T				S														T	T		S	B			B		B			S	S	S	S	S			T	T		B		S															T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																				.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	.	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	S	G	N	V	A	A	S	E	L	A	Q
Query Conservation																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	S	G	I	R	E	A	V	R	A	G	V	D	T	I	E	H	A	S	L	V	D	D	E	G	I	K	L	A	V	Q	K	G	A	Y	F	S	M	D	I	Y	N	T	D	Y	T	Q	A	E	G	K	K	N	G	V	L	E	D	N	L	R	K	D	R	D	I	G	E	L	Q	R	E	N	F	R	K	A	L	K
Template Known Secondary structure		S										T	T		S						T	T													T								S	T												T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																																							.																						.	.	.	.	.
Query SS confidence																																																							.																						.	.	.	.	.
Query Sequence		L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	H	I	.	.	.	.	.
Query Conservation																																																							.																						.	.	.	.	.
Alig confidence																																																							.																						.	.	.	.	.
Template Conservation
Template Sequence		A	G	V	K	M	V	Y	G	T	D	A	G	I	Y	P	H	G	D	N	A	K	Q	F	A	V	M	V	R	Y	G	A	T	P	L	Q	A	I	Q	S	A	T	L	T	A	A	E	A	L	G	R	S	K	D	V	G	Q	V	A	V	G	R	Y	G	D	M	I	A	V	A	G	D	P	L	A	D	V	T	T	L	E
Template Known Secondary structure			T									B	T	T	B		T	T		G	G	G								T	T										T	T								T		T	T	T	S	S	S			T	T	S	B							S	S		T	T	T		G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	D	H	V	W	R	Q	G	K	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	V	F	V	M	K	G	G	A	V	V
Template Known Secondary structure		S		S					T	T
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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