Return to main results Retrieve Phyre Job Id

Job DescriptionP16689
Confidence33.98%DateThu Jan 5 11:35:39 GMT 2012
Rank175Aligned Residues47
% Identity19%Templatec3e90B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ns3 protease; PDBTitle: west nile vi rus ns2b-ns3protease in complexed with2 inhibitor naph-kkr-h
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30..... ....40.......
Predicted Secondary structure 












...





Query SS confidence 


































. . .











Query Sequence  MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSR. . . LPEAMDGEGGWL
Query Conservation 


 
  

         
 
 

 
  

     ...   


  
  
Alig confidence 


































...











Template Conservation   
  
      


 

   
 
  



 

 
 






    
 

Template Sequence  IVVEPGKNVKNVRTKPGVFKTPEGEIGAVTLDFPTGTSGSPIVDKNGDVI
Template Known Secondary structure 

TTS



TT




TT
TT

TT

Template Predicted Secondary structure 

























Template SS confidence 

















































   98.100.........110.........120.........130.........140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions