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Job DescriptionP16689
Confidence100.00%DateThu Jan 5 11:35:39 GMT 2012
Rank34Aligned Residues337
% Identity18%Templatec3e0lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:guanine deaminase; PDBTitle: computationally designed ammelide deaminase
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IINNVKLVLENE. . . . . VVSGSLEVQN. GEIRAFAESQSR. . . . . . . . . . . LPEAMDGEGGWLLPGLIELHTDNLDKFFT
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Template Sequence  IFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQYSFA
Template Known Secondary structure  TT
TTSBGGGTT

GGG


TT

GGGGGGT
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   65.... 70.........80.........90.........100.........110.........120....
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Query Sequence  PRPKV. . . . . . . . . . . . . . . . . . . . DWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKR
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Template Sequence  GSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCM
Template Known Secondary structure  TS


S
TGGGSTTT

S
T


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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  GVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALA
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Template Sequence  DLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPGN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

SSSTTS


TT

SS
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   172.......180.........190.........200.........210....
 
   205....210.........220.........230.........240.. .......250.. .......260....
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Query Sequence  ARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQ. . . . . . . . . . . . . . . . . . . LGSVIAEFPT. TFEAAEASRKHG
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Template Conservation  .             
                                                                 
Template Sequence  . GVSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERG
Template Known Secondary structure  .S

TT
S
SSTTSSSTTT

STT
TT

T
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   215....220.........230.........240.........250.........260.........270.........280.........290...
 
   265....270.........280.........290.........300.........310........ .320.........330..
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Query Sequence  MNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQ. . . . . . . . . . . . SNRFTLPQAVKLVT
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Template Conservation        
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Template Sequence  ASIAHCPNSNLSLSS. . GFLNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLAT
Template Known Secondary structure 

TT
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TT



TTTS



TTSSSS


T
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   294.....300........ .310.........320.........330.........340.........350.........360.........370.
 
   333......340.... .....350.........360..... ....370........
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Query Sequence  KNPAQALNLQDR. GVIGEGKRADLVLAHRKDNHI. . . . . . . . . . . . . . . . . . . . . . . . . . . . HIDHVWRQGKRVF
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Template Sequence  LGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVV
Template Known Secondary structure  TT
TTTSSS

TTSB


TT
TT
S



TTSSSS
GGGT

GGGTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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