Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 16 Aligned Residues 357 % Identity 16% Template c3dc8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydropyrimidinase; PDBTitle: crystal structure of dihydropyrimidinase from sinorhizobium meliloti Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H	D
Query Conservation
Alig confidence																																	.																														.	.	.	.	.	.
Template Conservation																																	.																														.	.	.	.	.	.
Template Sequence		V	I	K	G	G	T	I	V	T	A	D	L	T	Y	K	A	D	V	K	V	E	G	G	R	I	V	E	I	G	P	N	.	L	S	G	A	E	T	L	D	A	T	G	C	Y	V	M	P	G	G	I	D	P	H	T	H	L	E	M	P	F	.	.	.	.	.	.	M	G	T	Y	S	S	D	D	F	E	S	G	T
Template Known Secondary structure					S						S	S											T	T							S	S	.				S						T	T														T	T				.	.	.	.	.	.	T	T				S
Template Predicted Secondary structure																																	.																														.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		R	A	A	L	A	G	G	T	T	M	V	V	D	F	A	L	P	S	G	Q	S	L	L	E	A	L	T	M	W	D	N	K	S	T	R	A	N	C	D	Y	S	F	H	M	A	I	T	W	W	.	.	.	.	.	.	.	.	.	G	E	Q	V	F	N	E	M	E	T	I	V	K	D	K	G	I	N	T	F	H	F
Template Known Secondary structure							T	T																										T	T	T		S	S										S		.	.	.	.	.	.	.	.	.	S														S				B			B
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	.	.	.	.	.	.	.	.	.	.	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	.	.	.	.	.	.	.	.	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K
Query Conservation																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	Y	K	G	A	L	M	V	D	D	D	E	M	F	S	S	F	Q	R	C	A	A	L	G	A	L	P	L	V	H	A	E	N	G	D	V	V	A	Q	L	Q	A	K	L	L	A	E	G	N	S	G	P	E	A	H	A	Y	S	R	P	A	E	V	E	G	E	A	A	N	R	A	I	M	I	A	D	M	A	G
Template Known Secondary structure		S		S	T	T	T	T	B																	T		B				B		S															T	T			S							T	S																				T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250								.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure															.	.	.															.	.	.	.	.	.	.
Query SS confidence															.	.	.															.	.	.	.	.	.	.
Query Sequence		I	A	L	A	S	H	D	D	A	T	H	A	H	.	.	.	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	.	.	.	.	.	.	.	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G
Query Conservation															.	.	.															.	.	.	.	.	.	.
Alig confidence															.	.	.															.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		C	P	V	Y	I	V	H	T	S	C	E	Q	A	H	E	A	I	R	R	A	R	A	K	G	M	R	V	F	G	E	P	L	I	Q	H	L	T	L	D	E	T	E	Y	F	D	K	D	W	D	H	A	A	R	R	V	M	S	P	P	F	.	.	.	.	R	N	K	L	H	Q	D	S	L	W	A	G	L	A	S	G
Template Known Secondary structure							S	S			S													T	T								B								G	G	G	G	G		S	S							T			S	S			.	.	.	.			G	G	G											T
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	A	A	F	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I	G	E	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		S	L	Q	V	V	A	T	D	H	C	A	F	T	T	E	Q	K	R	F	G	V	G	D	F	T	R	I	P	N	G	T	G	G	L	E	D	R	M	P	M	L	W	T	Y	G	V	A	T	G	R	I	T	M	N	E	F	V	A	V	T	S	T	N	I	A	K	I	L	N	I	Y	P	K	K	G	A	I	L	V	G
Template Known Secondary structure		S	S				B			B									G	G	G	T	T		G	G	G	S							T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.																							.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	A	D	L	V	L	A	H	R	K	D	N	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	A	D	L	V	V	W	D	P	K	R	S	K	T	I	S	A	K	T	Q	Q	S	A	I	D	Y	N	V	F	E	G	K	T	V	T	G	L	P	R	F	T	L	T	R	G	V	V	S	I
Template Known Secondary structure		S	B																G	G	G		S	S	S	S	S			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.