Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 6 Aligned Residues 356 % Identity 19% Template c2vr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidinase; PDBTitle: human dihydropyrimidinase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S	H
Query Conservation
Alig confidence																																.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation																																.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		L	L	I	R	G	G	R	V	V	N	D	D	F	S	E	V	A	D	V	L	V	E	D	G	V	V	R	A	L	G	.	.	.	.	.	H	L	R	V	L	D	A	A	G	K	L	V	L	P	G	G	I	D	T	H	T	H	M	Q	F	P	F	M	G	S	R	S	I	D	D	F	.	.	.	.	.	.	H	Q	G
Template Known Secondary structure						S						S	S											T	T							.	.	.	.	.								T	T	S													T	T		B		S	S	S	B		S			T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		T	K	A	A	L	S	G	G	T	T	M	I	I	D	F	A	I	P	Q	K	G	G	S	L	I	E	A	F	E	T	W	R	S	W	A	D	P	K	V	C	C	D	Y	S	L	H	V	A	V	T	.	.	.	.	.	.	.	.	W	W	S	D	Q	V	K	E	E	M	K	I	L	V	Q	D	K	G	V	N	S	F
Template Known Secondary structure							T	T	T												T	T															T	T	T		S	S										.	.	.	.	.	.	.	.	S		S													T	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.													.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	.	.	.	.	.	.	.	.	W	S	Q	P	N	R	E	S	I	A	A	L	C	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	M	F	M	A	Y	K	D	L	Y	M	V	T	D	L	E	L	Y	E	A	F	S	R	C	K	E	I	G	A	I	A	Q	V	H	A	E	N	G	D	L	I	A	E	G	A	K	K	M	L	A	L	G	I	T	G	P	E	G	H	E	L	C	R	P	E	A	V	E	A	E	A	T	L	R	A	I	T	I	A	S
Template Known Secondary structure					S	S	S	T	T	T	T	B																	T								S															T	T			S	T						T	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																	.	.	.															.	.	.	.	.	.	.
Query SS confidence																	.	.	.															.	.	.	.	.	.	.
Query Sequence		A	R	K	I	A	L	A	S	H	D	D	A	T	H	A	.	.	.	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	.	.	.	.	.	.	.	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A
Query Conservation																	.	.	.															.	.	.	.	.	.	.
Alig confidence																	.	.	.															.	.	.	.	.	.	.																														.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		A	V	N	C	P	L	Y	I	V	H	V	M	S	K	S	A	A	K	V	I	A	D	A	R	R	D	G	K	V	V	Y	G	E	P	I	A	A	S	L	G	T	D	G	T	H	Y	W	N	K	E	W	H	H	A	A	H	H	V	M	G	P	P	L	R	P	D	P	S	.	.	.	T	P	D	F	L	M	N	L	L
Template Known Secondary structure				T																							T	T								B								S	G	G	G	G		S	S						T	T			S	S				S		T	T	.	.	.
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																						310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																								.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																								.
Query Sequence		Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	R	V	A	D	D	Q	S	N	R	.	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																								.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																								.
Template Conservation
Template Sequence		A	N	D	D	L	T	T	T	G	T	D	N	C	T	F	N	T	C	Q	K	A	L	G	K	D	D	F	T	K	I	P	N	G	V	N	G	V	E	D	R	M	S	V	I	W	E	K	G	V	H	S	G	K	M	D	E	N	R	F	V	A	V	T	S	T	N	A	A	K	I	F	N	L	Y	P	R	K	G	R	I
Template Known Secondary structure			T	T	S	S				B			B									G	G	G	S	S		G	G	G	S				B			T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.																							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	G	S	D	A	D	I	V	I	W	D	P	K	G	T	R	T	I	S	A	K	T	H	H	Q	A	V	N	F	N	I	F	E	G	M	V	C	H	G	V	P	L	V	T	I	S	R	G	K	V	V	Y
Template Known Secondary structure		S	T	T	S	B																T	T	T		S	S	S		S			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.