Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 54 Aligned Residues 328 % Identity 19% Template c2ogjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of a dihydroorotase Resolution 2.62 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	.	Q	N	G	E	I	R	A	F	A	E	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S	S
Query Conservation																							.
Alig confidence													.										.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	L	T	N	V	K	P	V	G	F	.	S	Q	S	S	T	D	I	L	I	G	G	D	G	K	I	A	A	V	G	S	A	L	Q	A	P	A	D	T	Q	R	I	D	A	A	F	I	S	P	G	W	V	D	L	H	V	H	I	W	H	G	G	T	D	I	S	.	.	.	.	.	.	.	.	.	.	.	I	R
Template Known Secondary structure													.				S							T	T	S	B						S	S				S	S	S																						T	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.												.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	.	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		P	S	E	C	G	A	E	R	G	V	T	T	L	V	D	A	G	S	A	G	E	A	N	F	H	G	F	R	E	Y	I	I	E	P	S	R	E	R	I	K	A	F	L	N	L	G	S	I	G	L	V	A	C	N	R	V	P	E	L	R	D	I	K	D	I	D	L	D	R	I	L	E	C	Y	A	E	N	S	E	H
Template Known Secondary structure		G	G	G	S	S	G	G	G	T												G	G	G	S	T	T					T	T	T	T		S	S								S	S	T	T	T	T	T	T	T	T	T	S		S		S	S	G	G	G												T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	D	D	.	.	.	A	T	H	A
Query Conservation																																																																											.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	G	L	V	R	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	I	T	G	S	W	G	V	T	P	V	K	L	G	K	K	I	A	K	I	L	K	V	P	X	X	V	H	V	G	E	P	P	A	L	Y	D
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			S														T									S	T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.																																			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250											.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																																																						.	.
Query Sequence		H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	.	.	.	.	.	.	.	.	.	.	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.																																																						.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																								.	.	.	.																											.	.
Template Conservation																																																		.	.	.	.
Template Sequence		E	V	L	E	I	L	G	P	G	D	V	V	T	H	C	F	N	G	K	S	G	S	S	I	X	E	D	E	D	L	F	N	L	A	E	R	C	E	G	I	R	L	D	I	G	H	G	G	.	.	.	.	A	S	F	S	F	K	V	A	E	A	A	I	A	R	G	L	L	P	F	S	I	S	T	D	L	H	G	H
Template Known Secondary structure									T	T					S	T	B				T	T	T		S	S	S																					S	S	.	.	.	.	S	S	B											T	T				S						B	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
				304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																	.	.	.	.
Predicted Secondary structure		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	G	V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	H	I
Query Conservation		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	X	N	F	P	V	W	D	L	A	T	T	X	S	K	L	L	S	V	D	X	P	F	E	N	V	V	E	A	V	T	R	N	P	A	S	V	I	R	L	D	X	E	N	R	L	D	V	G	Q	R	A	D	F	T	V	F	D	L	V	D	A	D	L	E	A	T	D	S	N	G	D	V	S	R	L	K	R	L	F
Template Known Secondary structure				T	T	T														T	T									T	T	T							T	T				T	T	T	T	S	T	T	S	B																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	R	Y	A	V	I	G	A	E	A	I	A
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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