Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 24 Aligned Residues 360 % Identity 16% Template c2gwnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydroorotase; PDBTitle: the structure of putative dihydroorotase from porphyromonas2 gingivalis. Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	S	Q	.	.	.	.	.	.	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.
Template Sequence		I	L	L	R	N	A	L	I	T	N	E	G	K	T	F	P	G	S	V	X	I	D	G	A	F	I	S	R	I	I	E	G	E	L	P	A	D	D	N	L	S	A	D	E	V	I	E	C	S	G	L	R	L	F	P	G	C	I	D	D	Q	V	H	F	R	E	P	G	L	.	.	.	.	.	.	.	.	T	H	K
Template Known Secondary structure												T	T											T	T								S				T	T			T	T		S						T	T																T	T	T		.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																			.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	M	S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	H	L	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	I	A	S	E	S	R	A	A	V	A	G	G	V	T	S	F	X	D	X	P	N	T	N	P	P	T	T	X	W	E	R	L	L	E	K	R	Q	I	G	A	D	T	A	W	A	N	Y	G	F	F	F	G	G	T	N	D	N	I	D	E	I	K	R	V	D	K	H	L	V	P	G	L	L	F	L	G	S	S
Template Known Secondary structure														T	T								S		S	S	S		S		S																S	S										S	S							T			T	T	S		S				B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	N	X	L	V	D	N	K	E	T	L	E	K	I	F	G	E	C	D	L	L	I	A	T	H	C	E	K	E	E	I	I	R	A	N	K	E	H	Y	K	A	K	Y	G	N	D	L	D	I	H	F	H	P	L	I	R	S	E	E	.	.	.	.	.	.	.	.	.	.	A	C	Y	R	S	S	A	E	A	V
Template Known Secondary structure			G	G	G	B																S					B																				S				G	G	G					S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		A	L	C	R	A	R	K	I	A	L	A	S	H	D	D	A	T	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	.	.	.	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G
Query Conservation																																						.	.	.
Alig confidence																																						.	.	.
Template Conservation
Template Sequence		E	L	A	E	R	X	N	A	R	L	H	I	L	H	L	S	T	E	K	E	L	S	L	F	R	N	D	I	P	T	A	Q	K	R	I	T	S	E	V	C	V	H	H	L	W	F	S	D	T	D	Y	G	R	L	G	N	R	I	K	W	N	P	A	I	K	K	E	S	D	R	E	A	L	R	A	A	V	R	N	G
Template Known Secondary structure								T											T	G	G	G	G	G	S			S	S		G	G	G		S														G	G	G					G	G	G	G			S	S																		S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.																			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	G	V	I	G	E	G	K	R	A	D	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	D	I	I	A	T	D	H	A	P	H	L	L	R	E	K	E	G	S	C	L	Q	A	A	S	G	G	P	L	V	Q	H	S	L	L	A	L	L	E	L	C	N	Q	G	I	F	S	I	E	E	I	V	S	K	T	A	H	I	P	A	T	L	F	A	I	E	K	R	G	Y	I	R	P	G	Y	Y	A	D	L
Template Known Secondary structure		S	S							B										S		T	T	T	S							T	T	T											T	T	S	S										T								T	B	T	T		S	S			T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		356	.	.	.	360	.	.	.																							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	H	R	K	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	V	D	P	S	S	P	H	T	V	S	A	D	N	I	L	S	L	C	G	W	S	P	F	E	G	F	T	F	S	H	S	V	A	Y	T	F	V	N	G	C	L	A	Y
Template Known Secondary structure						T	T	S						T	T	T			S	T	T				T	T	T	T				S									T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430