Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 7 Aligned Residues 364 % Identity 16% Template c2gseC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydropyrimidinase-related protein 2; PDBTitle: crystal structure of human dihydropyrimidinease-like 2 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	.	.	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S
Query Conservation																																	.	.
Alig confidence																																	.	.																																.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		L	L	I	K	G	G	K	I	V	N	D	D	Q	S	F	Y	A	D	I	Y	M	E	D	G	L	I	K	Q	I	G	E	N	L	I	V	P	G	G	V	K	T	I	E	A	H	S	R	M	V	I	P	G	G	I	D	V	H	T	R	F	Q	M	P	D	.	.	.	.	.	.	Q	G	M	T	S	A	D	D	F	F
Template Known Secondary structure												S	S											T	T							S	S					S	S							T	T														T	T				.	.	.	.	.	.	T	T				S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		Q	G	T	K	A	A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	T	S	L	L	A	A	F	D	Q	W	R	E	W	A	D	S	K	S	C	C	D	Y	S	L	H	V	D	I	S	.	.	.	.	.	.	.	.	E	W	H	K	G	I	Q	E	E	M	E	A	L	V	K	D	H	G	V	N
Template Known Secondary structure											T												T	T	S																		S	S									S	.	.	.	.	.	.	.	.				T	T												S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.									.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	.	.	.	.	.	.	.	.	Q	P	N	R	E	S	I	A	A	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	L	V	Y	M	A	F	K	D	R	F	Q	L	T	D	C	Q	I	Y	E	V	L	S	V	I	R	D	I	G	A	I	A	Q	V	H	A	E	N	G	D	I	I	A	E	E	Q	Q	R	I	L	D	L	G	I	T	G	P	E	G	H	V	L	S	R	P	E	E	V	E	A	E	A	V	N	R	A	I	T	I
Template Known Secondary structure							S	S	S	T	T	T	T	B																T	T								S															T	T			S	T							S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																	.	.	.																																				.	.	.	.
Query SS confidence																	.	.	.																																				.	.	.	.
Query Sequence		C	R	A	R	K	I	A	L	A	S	H	D	D	A	T	.	.	.	H	A	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	.	.	.	.	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q
Query Conservation																	.	.	.																																				.	.	.	.
Alig confidence																	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		A	N	Q	T	N	C	P	L	Y	I	T	K	V	M	S	K	S	S	A	E	V	I	A	Q	A	R	K	K	G	T	V	V	Y	G	E	P	I	T	A	S	L	G	T	D	G	S	H	Y	W	S	K	N	W	A	K	A	A	A	F	V	T	S	P	P	L	S	P	D	P	T	T	P	D	F	L	N	S	L	L	S
Template Known Secondary structure						T										S													T	T								B								G	G	G	G	G		S								T			S	S				S		T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																							.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	A	A	F	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G	V	I	G
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		C	G	D	L	Q	V	T	G	S	A	H	C	T	F	N	T	A	Q	K	A	V	G	K	D	N	F	T	L	I	P	E	G	T	N	G	T	E	E	R	M	S	V	I	W	D	K	A	V	V	T	G	K	M	D	E	N	Q	F	V	A	V	T	S	T	N	A	A	K	V	F	N	L	Y	P	R	K	G	R	I	A
Template Known Secondary structure			T	S	S				B			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	S	S	S										T								T		T	T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.																							.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	S	D	A	D	L	V	I	W	D	P	D	S	V	K	T	I	S	A	K	T	H	N	S	S	L	E	Y	N	I	F	E	G	M	E	C	R	G	S	P	L	V	V	I	S	Q	G	K	I	V	L
Template Known Secondary structure		T	T	S	B																T	T	T	S	S	S	S		S			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.