Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 8 Aligned Residues 360 % Identity 16% Template c2ftwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydropyrimidine amidohydrolase; PDBTitle: crystal structure of dihydropyrimidinase from dictyostelium discoideum Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		M	I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	.	.	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M	S
Query Conservation																																	.	.
Alig confidence																																	.	.																																.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		I	L	I	K	N	G	T	V	V	N	D	D	R	Y	F	K	S	D	V	L	V	E	N	G	I	I	K	E	I	S	K	N	I	E	P	K	E	G	I	K	V	V	D	A	T	D	K	L	L	L	P	G	G	I	D	T	H	T	H	F	Q	L	P	F	.	.	.	.	.	.	M	G	T	V	S	V	D	D	F	D
Template Known Secondary structure						S						S	S											T	T							S						S	S							T	T														T	T				.	.	.	.	.	.	T	T				S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																					130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	R	L	H	L	R	C	E
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	T	Q	A	A	V	A	G	G	T	T	F	I	I	D	F	V	I	P	T	R	G	Q	S	L	L	E	A	Y	D	Q	W	K	K	W	A	D	E	K	V	N	C	D	Y	S	L	H	V	A	I	T	W	W	S	E	Q	V	S	R	E	M	E	I	L	V	K	E	R	G	V	N	S	F	C	F	M	A	Y	K
Template Known Secondary structure										T	T												T	T																T	T		S	S										S																S				B			B	S	S		T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V	T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		N	S	F	M	V	T	D	Q	E	M	Y	H	I	F	K	R	C	K	E	L	G	A	I	A	Q	V	H	A	E	N	G	D	M	V	F	E	G	Q	K	K	M	L	E	M	G	I	T	G	P	E	G	H	E	L	S	R	.	.	.	.	.	.	.	.	.	P	E	A	L	E	A	E	A	T	N	R	A	I	V	I
Template Known Secondary structure		T	T	T	B																	T		B				B		S															T	T			S	T							S	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220										.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																		.	.	.	.	.	.	.
Query SS confidence																			.	.	.																		.	.	.	.	.	.	.
Query Sequence		C	R	A	R	K	I	A	L	A	S	H	D	D	A	T	H	A	.	.	.	H	V	A	E	S	H	Q	L	G	S	V	I	A	E	F	P	T	.	.	.	.	.	.	.	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E
Query Conservation																			.	.	.																		.	.	.	.	.	.	.
Alig confidence																			.	.	.																		.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		A	D	S	V	C	T	P	V	Y	I	V	H	V	Q	S	I	G	A	A	D	V	I	C	K	H	R	K	E	G	V	R	V	Y	G	E	P	I	A	A	G	L	G	V	D	G	S	H	M	W	N	H	D	W	R	H	A	A	A	F	V	M	G	P	P	I	R	P	D	P	R	.	.	.	T	K	G	V	L	M	D
Template Known Secondary structure						T							S																T	T								B								G	G	G	G	G		S	S						T	T			S	S						T	T	.	.	.
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																							310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	A	S	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	.	G
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		Y	L	A	R	G	D	L	D	C	V	G	T	D	N	C	T	F	C	A	D	Q	K	A	M	G	K	D	D	F	T	K	I	P	N	G	V	N	G	V	E	D	R	M	S	I	V	W	E	N	G	V	N	T	G	K	L	T	W	C	Q	F	V	R	A	T	S	S	E	R	A	R	I	F	N	I	Y	P	R	K	G
Template Known Secondary structure						T	S	S				B			B									G	G	G	T	T		G	G	G	S				B			T	T	T										T	T	T	T	S	S										T							T	T		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																							.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	H	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	D	V	G	C	D	G	D	I	V	I	W	D	P	N	Q	S	K	T	I	S	K	D	T	H	H	H	A	V	D	F	N	I	F	E	G	I	K	V	T	G	I	A	V	T	T	I	V	A	G	N	I	V	W
Template Known Secondary structure				S	T	T	S	B																T	T	T				S	S	S			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.