Job Description P16689 Confidence 100.00% Date Thu Jan 5 11:35:39 GMT 2012 Rank 32 Aligned Residues 332 % Identity 17% Template c2aqoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:isoaspartyl dipeptidase; PDBTitle: crystal structure of e. coli isoaspartyl dipeptidase mutant e77q Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		I	I	N	N	V	K	L	V	L	E	N	E	V	V	S	G	S	L	E	V	Q	N	G	E	I	R	A	F	A	E	.	.	.	.	S	Q	S	R	L	P	E	A	M	D	G	E	G	G	W	L	L	P	G	L	I	E	L	H	T	D	N	L	D	K	F	F	T	P	R	P	K	V	D	W	P	A	H	S	A	M
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																																	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		L	L	Q	G	A	H	L	Y	A	P	E	D	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	.	.	.	.	.	Q	A	G	P	T	T	R	T	P
Template Known Secondary structure					S					S	S	S											T	T							S	S			T	T	S	S	S	S							T	T	S													T	T			B		.	.	.	.	.	T	T		G	G	G	B
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	H	D	A	L	M	V	A	S	G	I	T	T	V	L	D	A	V	A	I	G	D	V	R	D	G	G	D	R	L	E	N	L	E	K	M	I	N	A	I	E	E	T	Q	K	R	G	V	N	R	A	E	H	R	L	H	L	R	C	E	L	P	H	H	T	T	L	P	L	F	E	K	L	V	Q	R	E	P	V
Query Conservation
Alig confidence																																										.	.	.
Template Conservation																																										.	.	.
Template Sequence		E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	.	.	.	E	G	I	S	A	W	M	L	T	G	A	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R	V	I	G	V	C
Template Known Secondary structure											T	T										S			S	S																.	.	.		T	S									S	S	S	S				S	S	S										T	T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	S	L	M	D	H	S	P	G	Q	R	Q	F	A	N	R	E	K	Y	R	E	Y	Y	Q	G	K	Y	S	L	T	D	A	Q	M	Q	Q	Y	E	E	E	Q	L	A	L	A	A	R	W	S	Q	P	N	R	E	S	I	A	A	L	C	R	A	R	K	I	A	L	A	S	H	D	D	A	T	H	A	H	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L
Template Known Secondary structure				S	S	T	T	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S			B							S		T	T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																																			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		238	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																																															.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																																																															.
Query Sequence		A	E	S	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	V	I	A	E	F	P	T	T	F	E	A	A	E	A	S	R	K	H	G	M	N	V	L	M	G	A	P	N	I	V	R	G	G	S	H	S	G	N	V	A	A	S	E	L	A	Q	L	G	L	L	D	I	L	S	S	D	Y	Y	P	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																																															.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																																															.
Template Conservation
Template Sequence		Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F	E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S
Template Known Secondary structure									T	T					G	G	G						T	T	S	S													T	T							T	T			S	S	S												T	T			G	G	G							B	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	S	L	L	D	A	A	F	R	V	A	D	D	Q	S	N	R	F	T	L	P	Q	A	V	K	L	V	T	K	N	P	A	Q	A	L	N	L	Q	D	R	G	V	I	G	E	G	K	R	A	D	L	V	L	A	H	R	K	D	N	H	I	H	I	D	H	V	W	R	Q	G	K	R	V	F
Query Conservation		.	.
Alig confidence		.	.																																																										.	.	.
Template Conservation																																																													.	.	.
Template Sequence		V	A	G	F	E	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R	P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	P	E	.	.	.	L	R	I	E	Q	V	Y	A	R	G	K	L	M	V
Template Known Secondary structure					S																							G	G	G	T							T	T		T	T		S	S			T	T	S	B								T	T	.	.	.									T	T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.				.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions