 |
Job Description | P24193 | Confidence | 12.54% | Date | Thu Jan 5 11:41:07 GMT 2012 |
Rank | 89 | Aligned Residues | 55 |
% Identity | 9% | Template | d1jx6a_ |
SCOP info | Periplasmic binding protein-like I
| Periplasmic binding protein-like I
| L-arabinose binding protein-like
|
Resolution | 1.50 |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | A | I | C | G | T | A | N | D | V | A | V | S | G | A | I | P | . |
. |
. |
. |
. |
. |
R | Y | L | S | C | G | F | I | L | E | E | G | L | P | M | E | T | L | K | A | V | V | T | S | M | A | E | T | A | R | A | A | G | I | A | I | V |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
Q | R | N | L | T | N | A | L | S | E | A | V | R | A | Q | P | V | P | L | S | K | P | T | Q | R | P | I | K | I | S | V | V | Y | P | G | Q | Q | V | S | D | Y | W | V | R | N | I | A | S | F | E | K | R | L | Y | K | L | N | I | N | Y | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
| S | S |
|
| S | S |
|  |  |  |  |  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|