Job Description P24193 Confidence 100.00% Date Thu Jan 5 11:41:07 GMT 2012 Rank 19 Aligned Residues 269 % Identity 20% Template c3mdoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of a putative phosphoribosylformylglycinamidine2 cyclo-ligase (bdi_2101) from parabacteroides distasonis atcc 8503 at3 1.91 a resolution Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																						.																	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																						.																	.
Query Sequence		A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	P	.	.	.	.	.	.	.	.	.	.	.	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A	.	I	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	P	.	M	E	T	L	K	A	V	V	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																						.																	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																						.																	.
Template Conservation
Template Sequence		D	P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	X	Y	W	K	E	T	G	D	L	S	V	W	K	G	I	A	Q	D	A	L	I	X	N	I	D	D	L	L	C	V	G	A	V	D	N	I	L	V	S	S	T	I	G	R	N	K	L	L	V	P	G	E	V	I	S	A	I	I	N
Template Known Secondary structure			T	T											T	T															T	T																			T	T	T			S	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		115	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	A	E	T	A	R	A	A	.	.	.	.	.	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	V	D	K	L	F	I	N	T	A	G	M	G	A	I	P	A	N	I	H	W	G	A	Q	T	L	T	A	G	D	V	L	L	V	S	G	T	L	G	D	H	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		G	T	D	E	L	L	A	E	L	R	E	X	G	V	G	C	Y	A	T	G	G	E	T	A	D	V	G	D	L	V	.	R	T	I	I	V	D	S	T	V	T	C	R	X	K	R	S	D	V	I	D	N	K	N	I	Q	G	G	D	V	I	V	G	L	A	S	S	G	Q	A	T	Y	E	K	E	Y	N	G	G	X
Template Known Secondary structure													T	T														T	T	T		.	S	S													G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B
Template Predicted Secondary structure																																.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
			180	.	.	.	.	.	.	.	.																																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.
Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		.	G	A	T	I	L	N	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	G	L	D	G	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	.	.	I	P	G	V	K	A
Query Conservation		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		G	S	N	G	L	T	S	A	R	H	D	V	F	S	K	Y	L	A	K	K	Y	P	E	S	Y	D	A	A	V	P	K	E	L	V	Y	S	G	G	L	K	L	T	D	K	I	E	E	L	G	I	D	A	G	K	X	V	L	S	P	T	R	T	Y	A	P	V	I	K	V	L	L	D	K	L	R	S	Q	I	H	G
Template Known Secondary structure			S	S	S							T	T	B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T	T	T								T																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																		.	.	.								.
Query SS confidence																																																		.	.	.								.
Query Sequence		L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	L	S	E	A	A	L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	A	.	.	.	L	N	F	A	N	E	G	.	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H
Query Conservation																																																		.	.	.								.
Alig confidence																				.	.	.	.																											.	.	.								.
Template Conservation																				.	.	.	.
Template Sequence		X	V	H	C	S	G	G	A	Q	T	K	V	X	H	F	V	E	N	.	.	.	.	K	R	V	T	K	D	N	L	F	P	I	P	P	L	F	R	T	I	Q	E	Q	S	G	T	D	W	S	E	X	Y	K	V	F	N	X	G	H	R	X	E	I	Y	I	A	P	E	H	A	E	E	V	I	G	I	S	K	S	F
Template Known Secondary structure							S	S	G	G	G	G	G	G	G	T		S	S	.	.	.	.							S																										S		T	T									G	G	G										T	T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	.	.	G	V	R	L	A	G	L	Y	G	V	K	R	T
Query Conservation																		.	.
Alig confidence		.	.															.	.
Template Conservation		.	.
Template Sequence		.	.	G	I	D	A	Q	I	V	G	F	V	E	E	A	D	K	N	E	L	I	I	E	S	E	K	G	R	F	T	Y
Template Known Secondary structure		.	.	T													S	S								T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions