Job Description P24193 Confidence 100.00% Date Thu Jan 5 11:41:07 GMT 2012 Rank 20 Aligned Residues 265 % Identity 19% Template c3kizA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution Resolution 1.50 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	P	.	.	.	.	.	.	.	.	.	.	.	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A	I	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																														.						.
Template Conservation																																																														.						.
Template Sequence		P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	V	Y	W	K	E	T	G	D	I	S	V	W	K	G	I	A	Q	D	A	V	I	X	N	I	D	D	L	I	C	V	G	A	V	D	N	I	L	L	S	S	.	T	I	G	R	N	.	K	N	L	I	P	G	E	V	L	A	A	I	I
Template Known Secondary structure		T	T											T	T															T																			G	G	G	T			S	S						.						.	T	T	T	S
Template Predicted Secondary structure																																																														.						.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.
		118	.	120	.	.										.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.												.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	A	R	A	.	.	.	.	.	.	.	.	.	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	V	D	K	L	F	I	N	T	A	G	M	G	A	I	P	A	N	I	H	W	G	A	Q	T	L	T	A	G	D	V	L	L	V	S	G	T	.	.	.	.	.	.	.	.	.	.	.	L	G
Query Conservation							.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.															.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		N	G	T	E	E	V	L	Q	X	L	R	D	N	G	I	G	I	Y	S	T	G	G	E	T	A	D	V	G	.	D	L	V	R	T	I	I	V	D	S	T	V	T	C	R	X	K	R	Q	D	V	I	S	N	E	N	I	K	A	G	N	V	I	V	G	F	A	S	Y	G	Q	T	S	Y	E	T	E	Y	N	G	G
Template Known Secondary structure														T	T														T	.	T	T		S	S													G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B
Template Predicted Secondary structure																														.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		178	.	180	.	.	.	.	.	.	.	.																																							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		D	H	G	A	T	I	L	N	L	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	G	L	D	G	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	.	.	I	P	G	V	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		X	G	S	N	G	L	T	S	A	R	H	D	V	F	N	N	V	L	A	S	K	Y	P	E	S	F	D	P	K	V	P	E	N	L	V	Y	S	G	E	X	N	L	T	D	P	Y	L	N	V	P	L	D	A	G	K	L	V	L	S	P	T	R	T	Y	A	P	L	X	K	E	I	I	H	Q	Y	K	G	K	L	D
Template Known Secondary structure			T	T	S	S									B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T		S	S																								S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																		.	.	.									.
Query SS confidence																																																		.	.	.									.
Query Sequence		A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	L	S	E	A	A	L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	.	.	.	A	L	N	F	A	N	E	G	.	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S
Query Conservation																																																		.	.	.									.
Alig confidence																		.	.	.																														.	.	.									.
Template Conservation																		.	.	.
Template Sequence		G	V	V	H	C	S	G	G	G	Q	T	K	V	L	H	F	.	.	.	T	D	A	T	T	H	I	I	K	D	N	L	F	D	V	P	P	L	F	Q	L	I	Q	G	Q	S	N	T	P	W	E	E	X	Y	K	V	F	N	X	G	H	R	L	E	I	Y	T	D	A	A	H	A	E	G	X	I	A	I	A	K	K
Template Known Secondary structure								T	T	G	G	G	G	G	G	G	G	.	.	.			T	T							S																T										S		T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		294	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		H	P	L	G	K	D	A	A	L	I	G	E	V	.	.	.	V	E	R	K	G	V	R	L	A	G	L	Y	G	V	K
Query Conservation															.	.	.
Alig confidence			.	.											.	.	.
Template Conservation			.	.
Template Sequence		F	.	.	N	I	E	A	K	I	I	G	R	V	E	A	P	V	A	G	K	R	L	T	I	T	G	P	Q	G	T	E
Template Known Secondary structure		T	.	.	T											S		B	T	T	B	S						T	T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		361			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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