Job Description P24193 Confidence 100.00% Date Thu Jan 5 11:41:07 GMT 2012 Rank 15 Aligned Residues 288 % Identity 23% Template c2yxzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin-monophosphate kinase; PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8 Resolution 1.90 Å

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		12	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure							.																																																				.	.	.
Query SS confidence							.																																																				.	.	.
Query Sequence		G	Q	A	M	Q	.	Q	L	I	N	S	L	F	M	E	A	F	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	.	.	.	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S
Query Conservation							.																																																				.	.	.
Alig confidence							.																						.	.	.	.																											.	.	.
Template Conservation																													.	.	.	.
Template Sequence		K	D	L	G	E	R	A	L	L	A	R	L	A	P	L	G	Y	P	P	E	A	P	L	P	P	G	D	.	.	.	.	D	A	G	G	V	W	A	E	G	R	A	W	L	L	K	T	D	G	F	L	Y	R	E	V	A	L	K	G	M	G	P	F	E	V	G	F	R	G	V	A	A	T	A	S	D	L	L	A	K
Template Known Secondary structure														T	T	T	T			T	T		S	S		T	T	S	.	.	.	.	S	S						T	T																		T	T																					T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	A	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	V	D	K	L	F	I	N	T	A	G	M	G	A	I	P	A	N	I	H	W	G	A	Q	T	L	T	A	G
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.																			.
Template Conservation																																																			.	.	.	.	.	.	.																			.
Template Sequence		M	G	R	P	L	G	F	T	L	G	L	F	L	P	E	D	L	E	E	G	F	V	L	E	L	V	R	G	A	A	E	A	A	K	R	L	G	A	F	L	L	G	G	D	T	N	R	G	V	.	.	.	.	.	.	.	E	V	A	L	T	V	S	G	Y	A	L	A	E	A	P	L	P	R	.	K	A	L	P	G
Template Known Secondary structure		T														T	T																				T	T												S	.	.	.	.	.	.	.	S												S	S				S	.				T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																			.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.
		168	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure										.																				.	.
Query SS confidence										.																				.	.
Query Sequence		D	V	L	L	V	S	G	T	.	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	G	.	.	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	L
Query Conservation										.																				.	.
Alig confidence										.																				.	.																														.											.	.	.
Template Conservation																																																													.											.	.	.
Template Sequence		D	L	L	Y	L	A	G	D	R	W	G	R	T	G	A	A	I	R	A	H	Y	E	G	R	S	L	E	G	F	P	K	I	R	E	A	A	F	Y	P	L	P	R	L	E	L	L	A	L	S	G	L	L	R	G	S	L	D	S	S	.	D	G	L	A	E	T	L	W	Q	L	.	.	.	A	D	L	G	V	G	V
Template Known Secondary structure								S	S		T	T												T				T	T															G	G	G	G	G	G	T	T	T		S						S	.	S										.	.	.		T	T	T
Template Predicted Secondary structure																																																													.											.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		S	E	A	A	L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	A	.	.	.	L	N	F	A	N	E	G	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	G	V	R	L	A	G	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.																													.	.
Template Conservation																																																							.	.
Template Sequence		E	V	E	A	L	P	L	Y	P	D	V	L	A	F	A	G	S	E	E	A	A	L	E	L	V	L	Y	G	G	E	E	F	E	A	V	L	V	V	P	Q	E	G	A	A	A	V	E	A	R	A	K	A	K	.	.	G	L	P	L	F	R	A	G	R	V	V	A	G	E	G	V	Y	L	R	G	A
Template Known Secondary structure																	S	S										S													S	T	T											T	.	.	T											S	S	S					T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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