Job Description P24193 Confidence 100.00% Date Thu Jan 5 11:41:07 GMT 2012 Rank 1 Aligned Residues 323 % Identity 98% Template c2rb9D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hype protein; PDBTitle: crystal structure of e.coli hype Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Q	Q	L	I	N	S	L	F	M	E	A	F	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A	I	P	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	Q	Q	L	I	N	S	L	F	M	E	A	F	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A	I	P	R	Y
Template Known Secondary structure																						T			S	S													S												S	S	S			T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	A	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	V	D	K	L	F	I	N	T	A	G	M	G	A	I	P	A	N	I	H	W	G	A	Q	T	L	T	A	G	D	V	L	L	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	T	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	A	D	K	L	F	I	N	T	A	G	M	G	A	I	P	T	N	I	H	W	G	A	Q	T	L	T	A	G	D	I	L	L	V	S
Template Known Secondary structure										T	T																					T													T	T	S	S	S	S													T	T					G	G	G			T	T						S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	G	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	L	S	E	A	A	L	P	V	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	G	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	I	S	E	S	A	L	P	V	K	P
Template Known Secondary structure		S		S	S											T	T		S		T	T	T																	S	S	S										T	T														T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	R	G	V	C	E	L	L	G	L	D	A	L	N	F	A	N	E	G	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	G	V	R	L	A	G	L	Y	G	V	K	R	T	L	D	L	P	H	A	E	P	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	R	G	V	C	E	L	L	G	L	D	A	L	N	F	A	N	E	G	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	G	V	R	L	A	G	L	Y	G	V	K	R	T	L	D	L	P	H	A	E	P	L	P
Template Known Secondary structure											T			G	G	G	S			S	S								G	G	G										T	S	G	G	G	T	T									S	S		S						G	G	G									S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		334	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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