 |
Job Description | P24193 | Confidence | 10.89% | Date | Thu Jan 5 11:41:07 GMT 2012 |
Rank | 99 | Aligned Residues | 47 |
% Identity | 15% | Template | c2ka9A_ |
PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:disks large homolog 4; |
PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide
|
Resolution | UNK |
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | I | A | I | V | T | G | D | T | K | V | V | Q | R | G | A | V | D | K | L | F | I | N | T | A | G | M | G | A | I | P | A | N | I | H | W | G | A | Q | T | . |
L | T | A | G | D | V | L | L | V | S | G | T |
Query Conservation |   |
  |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |
|
|
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|
Template Sequence |   |
L | G | F | S | I | A | G | G | T | D | . |
. |
. |
. |
. |
. |
N | P | H | I | G | D | D | P | S | I | F | I | T | K | I | I | P | G | G | A | A | A | Q | D | G | R | L | R | V | N | D | S | I | L | F | V | N | E |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| S | S | . | . | . | . | . | . | S |
| S | S | S | S |
| S | S |
|  |  |  |  |  |
| T | T | S |  |  |  |  |  |
|
| S |
| T | T |
|  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|