Job Description P24193 Confidence 100.00% Date Thu Jan 5 11:41:07 GMT 2012 Rank 12 Aligned Residues 276 % Identity 23% Template c1vqvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thiamine monophosphate kinase; PDBTitle: crystal structure of thiamine monophosphate kinase (thil)2 from aquifex aeolicus Resolution 2.65 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		Q	Q	L	I	N	S	L	F	M	E	A	F	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	.	.	.	F	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A	I	P	R
Query Conservation																																																					.	.	.
Alig confidence													.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation													.	.	.	.												.	.	.	.	.	.	.	.	.
Template Sequence		F	G	L	I	D	L	I	K	K	T	L	.	.	.	.	E	S	K	V	I	D	D	T	A	P	V	.	.	.	.	.	.	.	.	.	E	K	L	L	L	T	T	D	V	L	N	E	G	V	H	F	L	R	S	Y	I	P	E	A	V	G	W	K	A	I	S	V	N	V	S	D	V	I	A	N	G	G	L	P	K
Template Known Secondary structure													.	.	.	.	T		T	T				B				.	.	.	.	.	.	.	.	.												B	T	T	T	B		T	T	S																			T	T	T
Template Predicted Secondary structure													.	.	.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	A	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	V	D	K	L	F	I	N	T	A	G	M	G	A	I	P	A	N	I	H	W	G	A	Q	T	L	T	A	G	D	V	L	L	V
Query Conservation
Alig confidence																																														.	.	.	.	.													.	.
Template Conservation																																														.	.	.	.	.													.	.
Template Sequence		W	A	L	I	S	L	N	L	P	E	D	L	E	V	S	Y	V	E	R	F	Y	I	G	V	K	R	A	C	E	F	Y	K	C	E	V	V	G	G	N	I	S	K	S	E	.	.	.	.	.	K	I	G	I	S	V	F	L	V	G	E	T	.	.	E	R	F	V	G	R	D	G	A	R	L	G	D	S	V	F	V
Template Known Secondary structure											T	T	S																				T												S	.	.	.	.	.	S												.	.	S	S				S	S				T	T
Template Predicted Secondary structure																																														.	.	.	.	.													.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		S	G	T	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	.	.	.	.	G	E	L	V	S	D	C	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E	L	S	E	A	A
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		S	G	T	L	G	D	S	R	A	G	L	E	L	L	L	X	E	K	E	E	Y	E	P	F	E	L	A	L	I	Q	R	H	L	R	P	T	A	R	I	D	Y	V	K	H	I	Q	K	Y	A	N	A	S	X	D	I	S	D	G	L	V	A	D	A	N	H	L	A	Q	R	S	G	V	K	I	E	I	L	S	E	K
Template Known Secondary structure			S		S	S											T	T		S	S														S					G	G	G									S							S													T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	A	.	.	.	.	L	N	F	A	N	E	G	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	G	V	R	L	A	G	L	Y	G	V	K	R	T	L
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.																					.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		L	P	L	S	N	E	L	K	X	Y	C	E	K	Y	G	K	N	P	I	E	Y	A	L	F	G	G	E	D	Y	Q	L	L	F	T	H	P	K	E	R	W	N	P	.	.	.	.	.	.	.	.	.	.	F	L	D	X	T	E	I	G	R	V	E	E	G	E	G	V	F	V	D	G	.	.	.	.	.	K	K	V
Template Known Secondary structure		S													T	T									S													G	G	G			S	.	.	.	.	.	.	.	.	.	.	S	S										S	S	S					T	T	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.											.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.
		325	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions